Entry Detail



General Information

Database ID:exR0477693
RNA Name:hsa-miR-15b-5p
RNA Type:miRNA
Chromosome:chr3
Starnd:+
Coordinate:
Start Site(bp):160404607End Site(bp):160404628
External Links:hsa-miR-15b-5p



Disease Information

Disease Name:HIV-1
Disease Category:Infections
MeSH ID:D015658
Type:Diseases Category/Infections
Alias:HIV Infection//HIV Infections//Infection, HIV//Infections, HIV//HTLV-III-LAV Infections//HTLV III LAV Infections//HTLV-III-LAV Infection//Infection, HTLV-III-LAV//Infections, HTLV-III-LAV//T-Lymphotropic Virus Type III Infections, Human//T Lymphotropic Virus Type III Infections, Human//HTLV-III Infections//HTLV III Infections//HTLV-III Infection//Infection, HTLV-III//Infections, HTLV-III//HIV Coinfection//Coinfection, HIV//Coinfections, HIV//HIV Coinfections



Expression Detail

GEO ID:GSE143039
Description:Differential expression profiling of human milk derived exosomal MicroRNAs in HIV-1 infected Women from Nigeria
Experimental Design:Disease vs Control
Case Disease Type:HIV-1
Case Disease SubType:NA
Case Sample:HIV-1
Control Sample:Control
Number of Case:27
Number of Control:9
Number of Samples:36





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
URM1
chr9
128371361
128392016
+
STEAP3
chr2
119223831
119265652
+
ABCF3
chr3
184186023
184194012
+
RAB11FIP1
chr8
37858618
37899497
-
FAM89A
chr1
231018958
231040254
-
LITAF
chr16
11547722
11636381
-
ZBTB34
chr9
126860665
126885878
+
LY6E
chr8
143017982
143023832
+
ATG14
chr14
55366391
55411830
-
MINDY2
chr15
58771192
58861900
+
MRPS2
chr9
135499984
135504673
+
DCAF7
chr17
63550477
63594279
+
ANKRD17
chr4
73073376
73258798
-
JARID2
chr6
15246069
15522042
+
RAPGEF1
chr9
131576770
131740074
-
MLEC
chr12
120687149
120701859
+
FAM102B
chr1
108560089
108644900
+
ARRDC4
chr15
97960703
97973833
+
ERG28
chr14
75649791
75660876
-
CRY2
chr11
45847118
45883248
+
TSPYL2
chrX
53082367
53088540
+
E2F3
chr6
20401879
20493714
+
ABHD2
chr15
89087459
89202355
+
PIK3R1
chr5
68215756
68301821
+
MED11
chr17
4731428
4733607
+
SCAMP4
chr19
1905372
1926013
+
SRPK1
chr6
35832966
35921342
-
FLOT2
chr17
28879335
28897733
-
MYB
chr6
135181308
135219173
+
HDGF
chr1
156742109
156766925
-
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000540
chr14
55799534
55821940
+
hsa_circ_0001005
chr2
53921020
53978078
-
hsa_circ_0001723
chr7
91924202
91948826
+
hsa_circ_0000458
chr12
124071293
124074996
+
hsa_circ_0001699
chr7
40027197
40041630
+
hsa_circ_0001387
chr4
1902352
1936989
+
hsa_circ_0001168
chr20
47691321
47707559
+
hsa_circ_0000552
chr14
71880664
71948928
+
hsa_circ_0000038
chr1
28800065
28802803
+
hsa_circ_0000652
chr15
90984737
90986710
+
hsa_circ_0001472
chr5
36953719
36976504
+
hsa_circ_0001263
chr3
5215701
5216099
+
hsa_circ_0000799
chr17
65941524
65972074
+
hsa_circ_0001164
chr20
45891031
45923523
-
hsa_circ_0000032
chr1
25666964
25669564
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
LINC00649
chr21
33915534
33977691
+
AL031282.2
chr1
1702736
1737688
-
MZF1-AS1
chr19
58559129
58574797
+
SNHG16
chr17
76557764
76565348
+
XIST
chrX
73820649
73852723
-
STAG3L5P-PVRIG2P-PILRB
chr7
100336104
100367831
+
NUTM2B-AS1
chr10
79661394
79826594
-
MCM3AP-AS1
chr21
46229196
46259390
+
AL391244.1
chr1
1420245
1422691
+
AC003092.1
chr7
94022833
94066661
+
AC114980.1
chr5
93860669
93863825
-
AC079781.5
chr7
97851688
97972985
-
AC021092.1
chr19
44103007
44113183
-
AC009022.1
chr16
69976297
70065948
-
AL359924.1
chr1
237862175
237928321
+
FGD5-AS1
chr3
14920347
14948424
-
MIR497HG
chr17
7015818
7019659
-
AC021078.1
chr5
149494314
149504670
-
LINC01184
chr5
127939152
128083172
-
NEAT1
chr11
65422774
65445540
+
SNHG1
chr11
62851984
62855953
-
AC002470.2
chr22
20979462
20998121
+
MIR29B2CHG
chr1
207801518
207879115
-
LINC00662
chr19
27681072
27794005
-
MIR503HG
chrX
134543119
134546642
-
SNHG25
chr17
64145970
64146476
+
LINC02035
chr3
122886941
122892416
+
NUTM2A-AS1
chr10
87201647
87342612
-
HCG18
chr6
30286690
30327382
-
SNHG12
chr1
28578538
28583132
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA