Entry Detail



General Information

Database ID:exR0477694
RNA Name:hsa-miR-16-5p
RNA Type:miRNA
Chromosome:chr3
Starnd:+
Coordinate:
Start Site(bp):160404754End Site(bp):160404775
External Links:hsa-miR-16-5p



Disease Information

Disease Name:HIV-1
Disease Category:Infections
MeSH ID:D015658
Type:Diseases Category/Infections
Alias:HIV Infection//HIV Infections//Infection, HIV//Infections, HIV//HTLV-III-LAV Infections//HTLV III LAV Infections//HTLV-III-LAV Infection//Infection, HTLV-III-LAV//Infections, HTLV-III-LAV//T-Lymphotropic Virus Type III Infections, Human//T Lymphotropic Virus Type III Infections, Human//HTLV-III Infections//HTLV III Infections//HTLV-III Infection//Infection, HTLV-III//Infections, HTLV-III//HIV Coinfection//Coinfection, HIV//Coinfections, HIV//HIV Coinfections



Expression Detail

GEO ID:GSE143039
Description:Differential expression profiling of human milk derived exosomal MicroRNAs in HIV-1 infected Women from Nigeria
Experimental Design:Disease vs Control
Case Disease Type:HIV-1
Case Disease SubType:NA
Case Sample:HIV-1
Control Sample:Control
Number of Case:27
Number of Control:9
Number of Samples:36





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AMER1
chrX
64185117
64205708
-
ANKRD17
chr4
73073376
73258798
-
ARHGAP35
chr19
46860997
47005077
+
ARHGDIA
chr17
81867721
81871378
-
ARRDC4
chr15
97960703
97973833
+
ASB1
chr2
238426742
238452250
+
ATXN7L3
chr17
44191805
44200113
-
BACE1
chr11
117285207
117316259
-
BIRC5
chr17
78214186
78225636
+
CYB561A3
chr11
61348745
61362299
-
DCAF7
chr17
63550477
63594279
+
FAM89A
chr1
231018958
231040254
-
FLOT2
chr17
28879335
28897733
-
FSD1
chr19
4304598
4323843
+
ITPR1
chr3
4493345
4847840
+
JARID2
chr6
15246069
15522042
+
KDSR
chr18
63327726
63367228
-
MAPK1IP1L
chr14
55051647
55070194
+
MAPKBP1
chr15
41774434
41827855
+
PLPP6
chr9
4662294
4665258
+
RTL8B
chrX
135020513
135022542
-
SEC61A1
chr3
128051641
128071683
+
STEAP3
chr2
119223831
119265652
+
TBRG1
chr11
124622836
124635926
+
TOB2
chr22
41433494
41446801
-
UNC119B
chr12
120710458
120723640
+
ZBTB34
chr9
126860665
126885878
+
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000540
chr14
55799534
55821940
+
hsa_circ_0001005
chr2
53921020
53978078
-
hsa_circ_0001723
chr7
91924202
91948826
+
hsa_circ_0000458
chr12
124071293
124074996
+
hsa_circ_0001699
chr7
40027197
40041630
+
hsa_circ_0001387
chr4
1902352
1936989
+
hsa_circ_0001168
chr20
47691321
47707559
+
hsa_circ_0000552
chr14
71880664
71948928
+
hsa_circ_0000038
chr1
28800065
28802803
+
hsa_circ_0000652
chr15
90984737
90986710
+
hsa_circ_0001472
chr5
36953719
36976504
+
hsa_circ_0001263
chr3
5215701
5216099
+
hsa_circ_0000799
chr17
65941524
65972074
+
hsa_circ_0001164
chr20
45891031
45923523
-
hsa_circ_0000032
chr1
25666964
25669564
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC079781.5
chr7
97851688
97972985
-
HCG18
chr6
30286690
30327382
-
XIST
chrX
73820649
73852723
-
FGD5-AS1
chr3
14920347
14948424
-
LINC00649
chr21
33915534
33977691
+
AC009022.1
chr16
69976297
70065948
-
AC114980.1
chr5
93860669
93863825
-
AC002470.2
chr22
20979462
20998121
+
SNHG16
chr17
76557764
76565348
+
LINC01184
chr5
127939152
128083172
-
NEAT1
chr11
65422774
65445540
+
AC021078.1
chr5
149494314
149504670
-
AL359924.1
chr1
237862175
237928321
+
LINC02035
chr3
122886941
122892416
+
NUTM2B-AS1
chr10
79661394
79826594
-
SNHG25
chr17
64145970
64146476
+
AC003092.1
chr7
94022833
94066661
+
AP000317.2
chr21
34073592
34360033
+
MIR497HG
chr17
7015818
7019659
-
SNHG12
chr1
28578538
28583132
-
MIR29B2CHG
chr1
207801518
207879115
-
AC020978.7
chr16
68224713
68227734
+
MZF1-AS1
chr19
58559129
58574797
+
SNHG1
chr11
62851984
62855953
-
MCM3AP-AS1
chr21
46229196
46259390
+
LINC00662
chr19
27681072
27794005
-
NUTM2A-AS1
chr10
87201647
87342612
-
AL031282.2
chr1
1702736
1737688
-
MIR503HG
chrX
134543119
134546642
-
AL391244.1
chr1
1420245
1422691
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA