exRNAdisease

Entry Detail

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General Information

Database ID: exR0478018 RNA Name: hsa-miR-485-5p RNA Type: miRNA Chromosome: chr14 Starnd: + Coordinate: Start Site(bp): 101055427 End Site(bp): 101055448 External Links: hsa-miR-485-5p

Disease Information

Disease Name: HIV-1 Disease Category: Infections MeSH ID: D015658 Type: Diseases Category/Infections Alias: HIV Infection//HIV Infections//Infection, HIV//Infections, HIV//HTLV-III-LAV Infections//HTLV III LAV Infections//HTLV-III-LAV Infection//Infection, HTLV-III-LAV//Infections, HTLV-III-LAV//T-Lymphotropic Virus Type III Infections, Human//T Lymphotropic Virus Type III Infections, Human//HTLV-III Infections//HTLV III Infections//HTLV-III Infection//Infection, HTLV-III//Infections, HTLV-III//HIV Coinfection//Coinfection, HIV//Coinfections, HIV//HIV Coinfections

Expression Detail

GEO ID: GSE143039 Description: Differential expression profiling of human milk derived exosomal MicroRNAs in HIV-1 infected Women from Nigeria Experimental Design: Disease vs Control Case Disease Type: HIV-1 Case Disease SubType: NA Case Sample: HIV-1 Control Sample: Control Number of Case: 27 Number of Control: 9 Number of Samples: 36

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ZDHHC18 chr1 26826688 26857604 + ZNF106 chr15 42412823 42491141 - IFI6 chr1 27666064 27672198 - FAM102A chr9 127940582 127980989 - SUMF2 chr7 56064002 56080670 + TAOK1 chr17 29390464 29551904 + MAP7D1 chr1 36155579 36180849 + PSKH1 chr16 67893254 67929676 + TSPAN4 chr11 842812 867116 + GOLGA3 chr12 132768914 132829078 - RAB35 chr12 120095099 120117502 - MPDU1 chr17 7583529 7592789 + THY1 chr11 119417378 119424985 - TSR2 chrX 54440404 54448032 + AP1M1 chr19 16197578 16245907 + ARRDC1 chr9 137605685 137615360 + COQ9 chr16 57447425 57461270 + RMI2 chr16 11249619 11381662 + MEPCE chr7 100428790 100434118 + GBF1 chr10 102245532 102382899 + KRT80 chr12 52168996 52192014 - CAPZB chr1 19338775 19485539 - GRHL2 chr8 101492439 101669726 + RHOB chr2 20447074 20449440 + INO80 chr15 40978880 41116280 - ABAT chr16 8674596 8784575 + B4GALT5 chr20 49632945 49713878 - RCC2 chr1 17406760 17439677 - AKT2 chr19 40230317 40285536 - SMAD7 chr18 48919853 48952052 - miRNA targets: NA circRNA targets: circRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa_circ_0001454 chr4 154524454 154533552 + hsa_circ_0000417 chr12 69644908 69656342 + hsa_circ_0000798 chr17 65941524 65944422 + hsa_circ_0000552 chr14 71880664 71948928 + hsa_circ_0001146 chr20 34241449 34246936 - hsa_circ_0000799 chr17 65941524 65972074 + lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC005899.4 chr17 32328441 32329395 + AC016065.1 chr8 6403551 6407142 - AC016355.1 chr15 67541072 67542604 - AC016876.2 chr17 7581964 7584086 - AC026362.1 chr12 122975320 122982907 + AC069281.2 chr7 100572232 100578700 - AC074117.1 chr2 27356246 27367622 + AC118758.3 chr7 56809214 56848800 - AL022311.1 chr22 37876148 37895563 + AL132655.2 chr20 58817132 58817725 - AP000662.1 chr11 57638024 57652790 + COL4A2-AS2 chr13 110456396 110463287 - GAS5 chr1 173858559 173868882 - LINC00265 chr7 39733430 39793092 + LINC01278 chrX 63222993 63561095 - LINC01772 chr1 16460948 16468481 + MALAT1 chr11 65497688 65506516 + MIR29B2CHG chr1 207801518 207879115 - NEAT1 chr11 65422774 65445540 + NUTM2A-AS1 chr10 87201647 87342612 - SNHG16 chr17 76557764 76565348 + SNHG3 chr1 28505980 28510892 + XIST chrX 73820649 73852723 - ZFHX2-AS1 chr14 23511760 23560778 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA