Entry Detail



General Information

Database ID:exR0478112
RNA Name:hsa-miR-520e-3p
RNA Type:miRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):53675764End Site(bp):53675784
External Links:hsa-miR-520e-3p



Disease Information

Disease Name:HIV-1
Disease Category:Infections
MeSH ID:D015658
Type:Diseases Category/Infections
Alias:HIV Infection//HIV Infections//Infection, HIV//Infections, HIV//HTLV-III-LAV Infections//HTLV III LAV Infections//HTLV-III-LAV Infection//Infection, HTLV-III-LAV//Infections, HTLV-III-LAV//T-Lymphotropic Virus Type III Infections, Human//T Lymphotropic Virus Type III Infections, Human//HTLV-III Infections//HTLV III Infections//HTLV-III Infection//Infection, HTLV-III//Infections, HTLV-III//HIV Coinfection//Coinfection, HIV//Coinfections, HIV//HIV Coinfections



Expression Detail

GEO ID:GSE143039
Description:Differential expression profiling of human milk derived exosomal MicroRNAs in HIV-1 infected Women from Nigeria
Experimental Design:Disease vs Control
Case Disease Type:HIV-1
Case Disease SubType:NA
Case Sample:HIV-1
Control Sample:Control
Number of Case:27
Number of Control:9
Number of Samples:36





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
SLC16A14
chr2
230034982
230068993
-
ADAR
chr1
154582057
154628013
-
TRIB1
chr8
125430358
125438403
+
ARL4A
chr7
12686856
12690958
+
EIF5A2
chr3
170888418
170908644
-
ATXN1
chr6
16299112
16761491
-
PHC3
chr3
170086732
170181749
-
DIP2A
chr21
46458891
46570015
+
MLLT1
chr19
6210381
6279975
-
SBF1
chr22
50445000
50475035
-
CLIP4
chr2
29097705
29189643
+
JPT1
chr17
75135248
75168281
-
SEMA3C
chr7
80742538
80922359
-
USP24
chr1
55066359
55215364
-
CHD9
chr16
53055033
53329150
+
C9orf40
chr9
74946583
74952912
-
CUL1
chr7
148697914
148801110
+
RGMA
chr15
93035273
93089204
-
CAMK2N1
chr1
20482391
20486210
-
PTP4A1
chr6
63521746
63583436
+
CLCN6
chr1
11806096
11848079
+
TRIM37
chr17
58982638
59106921
-
MAGI3
chr1
113390515
113685923
+
RAB31
chr18
9708275
9862551
+
OCRL
chrX
129539849
129592561
+
APP
chr21
25880550
26171128
-
SIRPA
chr20
1894167
1940592
+
CCDC93
chr2
117915478
118014133
-
KIAA1522
chr1
32741830
32774970
+
SEC16A
chr9
136440096
136483759
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL049840.4
chr14
103694516
103695050
-
ARHGAP27P1-BPTFP1-KPNA2P3
chr17
64749663
64781707
-
FGD5-AS1
chr3
14920347
14948424
-
MIR17HG
chr13
91347820
91354579
+
NEAT1
chr11
65422774
65445540
+
NORAD
chr20
36045618
36051018
-
SNHG16
chr17
76557764
76565348
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA