Entry Detail


General Information

Database ID:exR0500573
RNA Name:HLA-A
RNA Type:mRNA
Chromosome:chr6
Starnd:+
Coordinate:
Start Site(bp):29941260End Site(bp):29945884
External Links:ENSG00000206503



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ACHE
chr7
100889994
100896974
-
ACTR3
chr2
113890063
113962596
+
ABCD1
chrX
153724856
153744755
+
AGGF1
chr5
77029251
77065234
+
ABHD2
chr15
89087459
89202355
+
AC005258.1
chr19
2269525
2341172
+
AKR1A1
chr1
45550543
45570049
+
ACO2
chr22
41469117
41528989
+
ACTB
chr7
5527148
5563784
-
ACTC1
chr15
34790230
34795549
-
ADCY1
chr7
45574140
45723116
+
AFG3L2
chr18
12328944
12377227
-
AL162417.1
chr9
133098121
133163914
-
ALDOA
chr16
30064164
30070457
+
AFTPH
chr2
64524305
64593005
+
AL807752.6
chr9
137031241
137040436
-
AC092073.1
chr19
34396315
34409364
+
AC004922.1
chr7
99325879
99394653
+
AGPAT1
chr6
32168212
32178096
-
AL022238.4
chr22
40346529
40410054
+
AHCY
chr20
34280268
34311802
-
AC007192.1
chr19
18153158
18178117
+
AHCYL1
chr1
109984765
110023742
+
AL136295.5
chr14
24147548
24166452
+
ACIN1
chr14
23058564
23095614
-
AL136454.1
chr1
192716132
192716653
+
AC120057.2
chr17
7240427
7244635
-
AGO1
chr1
35869808
35930532
+
AC027644.4
chr7
66628958
66811189
+
AC068547.1
chr2
151802651
151973949
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-4680-5p
chr10
110898094
110898116
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007952.4
chr17
19112000
19112636
-
AC008443.1
chr5
181246507
181272167
+
AC009686.2
chr8
80032724
80033300
-
AC010327.5
chr19
55216660
55221616
+
AC016876.2
chr17
7581964
7584086
-
AC023509.1
chr12
53441741
53467528
+
AC026362.1
chr12
122975320
122982907
+
AC084824.5
chr12
32736930
32737660
-
AC245884.11
chr19
54308915
54337168
-
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.