Entry Detail


General Information

Database ID:exR0500575
RNA Name:HLA-C
RNA Type:mRNA
Chromosome:chr6
Starnd:-
Coordinate:
Start Site(bp):31268749End Site(bp):31272130
External Links:ENSG00000204525



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCF1
chr6
30571393
30597179
+
AC005258.1
chr19
2269525
2341172
+
AC010323.1
chr19
8308283
8321379
-
AC015813.2
chr17
57989038
58007246
-
AC018523.2
chr11
14493783
14520344
-
AC024592.3
chr19
5866171
5903787
-
AC027644.4
chr7
66628958
66811189
+
AC087289.3
chr17
75898645
75930129
-
ACOT9
chrX
23701055
23766475
-
ACSS2
chr20
34872146
34927962
+
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACTL6A
chr3
179562886
179588407
+
ACTR6
chr12
100199122
100241865
+
AD000671.1
chr19
35745678
35754519
+
ADA
chr20
44619522
44652233
-
ADD1
chr4
2843857
2930076
+
ADD3
chr10
109996368
110135565
+
ADORA2A
chr22
24417879
24442357
+
AFF1
chr4
86935002
87141054
+
AGPAT3
chr21
43865223
43987592
+
AHRR
chr5
271670
438291
+
AIMP1
chr4
106315544
106349456
+
AKR1A1
chr1
45550543
45570049
+
AKT1S1
chr19
49869033
49878459
-
AKT3
chr1
243488233
243851079
-
AL110118.2
chr14
93184973
93218586
+
AL133352.1
chr10
100505628
100529881
-
AL136295.5
chr14
24147548
24166452
+
AL928654.3
chr14
105487199
105492267
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-6891-3p
chr6
31355228
31355248
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AC093512.1
chr16
30064306
30064825
-
AC099329.1
chr3
42785087
42852428
-
AD000090.1
chr19
35557956
35581954
+
AF131216.4
chr8
11283481
11285068
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.