Entry Detail


General Information

Database ID:exR0500582
RNA Name:HLA-DQA1
RNA Type:mRNA
Chromosome:chr6
Starnd:+
Coordinate:
Start Site(bp):32628179End Site(bp):32647062
External Links:ENSG00000196735



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCF1
chr6
30571393
30597179
+
ABI2
chr2
203328239
203447728
+
AC006538.2
chr19
2717769
2740048
-
AC007192.1
chr19
18153158
18178117
+
AC007998.2
chr18
35443871
35497940
-
AC011448.1
chr19
19516227
19536076
+
AC011462.1
chr19
41350853
41425001
+
AC026464.4
chr16
69299682
69322700
+
AC068580.4
chr11
1734821
1763954
-
AC073082.1
chr2
48632291
48755724
-
ACAD11
chr3
132558138
132660082
-
ACAD8
chr11
134253495
134265855
+
ACTA2
chr10
88935074
88991339
-
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACTR3
chr2
113890063
113962596
+
ADPRHL2
chr1
36088892
36093932
+
AHCY
chr20
34280268
34311802
-
AHRR
chr5
271670
438291
+
AIFM1
chrX
130129362
130165887
-
AL021997.3
chr6
28267121
28281580
+
AL136454.1
chr1
192716132
192716653
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005083.1
chr7
20217577
20221700
+
AC005899.4
chr17
32328441
32329395
+
AC007996.1
chr18
26542971
26545791
-
AC010618.3
chr19
17488990
17511889
-
AC012236.1
chr15
31221999
31230838
-
AC019205.1
chr6
73263212
73301789
+
AC099329.1
chr3
42785087
42852428
-
AC107027.3
chr3
131455126
131458598
-
AD000090.1
chr19
35557956
35581954
+
AL031428.1
chr1
23020147
23088058
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.