Entry Detail


General Information

Database ID:exR0500630
RNA Name:HNRNPA0
RNA Type:mRNA
Chromosome:chr5
Starnd:-
Coordinate:
Start Site(bp):137745651End Site(bp):137754363
External Links:ENSG00000177733



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AACS
chr12
125065434
125143333
+
ABCA2
chr9
137007234
137028922
-
AC005258.1
chr19
2269525
2341172
+
AC006030.1
chr2
74211604
74363377
-
AC010422.3
chr19
12643831
12648397
-
AC010463.1
chr19
17267418
17282966
+
AC087289.3
chr17
75898645
75930129
-
AC093525.2
chr16
2496032
2520218
+
AC097637.1
chr3
52221081
52231190
-
AC099811.2
chr17
42119674
42154916
-
AC107871.1
chr15
68184032
68229718
-
AC129492.3
chr17
8150816
8162975
-
AC135050.2
chr16
31083439
31094956
-
ACAT2
chr6
159762045
159779112
+
ACOT7
chr1
6264269
6394391
-
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACTN1
chr14
68874143
68979440
-
ADAR
chr1
154582057
154628013
-
AGGF1
chr5
77029251
77065234
+
AKAP8
chr19
15353385
15379798
-
AKIRIN1
chr1
38991276
39006059
+
AL021546.1
chr12
120438198
120460006
+
AL117348.2
chr1
225886696
225924278
-
AL121594.1
chr14
35122549
35317474
+
AL136531.2
chr20
1317571
1393096
-
AL365205.1
chr6
41780349
41790141
+
ALAS1
chr3
52198086
52214327
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-21-5p
chr17
59841273
59841294
+
hsa-miR-1181
chr19
10403505
10403525
-
hsa-miR-1248
chr3
186786675
186786701
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC002094.1
chr17
28357647
28381697
+
AC007952.4
chr17
19112000
19112636
-
AC010327.5
chr19
55216660
55221616
+
AC012485.1
chr2
238231684
238255633
+
AC016876.2
chr17
7581964
7584086
-
AC068134.2
chr2
232420661
232421461
-
AC087190.3
chr16
9104848
9113181
+
AC132217.1
chr11
2129121
2129964
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.