Entry Detail


General Information

Database ID:exR0500767
RNA Name:HSP90AA1
RNA Type:mRNA
Chromosome:chr14
Starnd:-
Coordinate:
Start Site(bp):102080738End Site(bp):102139699
External Links:ENSG00000080824



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC093525.2
chr16
2496032
2520218
+
ADD3
chr10
109996368
110135565
+
AL110118.2
chr14
93184973
93218586
+
ADCY5
chr3
123282296
123449758
-
AL133352.1
chr10
100505628
100529881
-
AFDN
chr6
167826922
167972023
+
ACLY
chr17
41866917
41930542
-
AL034430.1
chr20
10413520
10431922
-
ACO1
chr9
32384603
32454769
+
AL121753.1
chr20
35267885
35280043
-
ABR
chr17
1003518
1229738
-
AD000671.1
chr19
35745678
35754519
+
AKAP1
chr17
57085092
57121346
+
AIF1L
chr9
131096476
131123152
+
AC015813.2
chr17
57989038
58007246
-
AHCY
chr20
34280268
34311802
-
ACTG1
chr17
81509971
81523847
-
AC120057.2
chr17
7240427
7244635
-
AKIRIN2
chr6
87674860
87702233
-
AL136454.1
chr1
192716132
192716653
+
ABCD3
chr1
94418389
94518666
+
ACTN1
chr14
68874143
68979440
-
ALDH7A1
chr5
126531200
126595362
-
AC091167.2
chr15
90249556
90272208
+
ABLIM1
chr10
114431113
114768061
-
AC023055.1
chr12
55757275
55827546
-
AC010422.3
chr19
12643831
12648397
-
AL139011.2
chr1
160216800
160285130
-
AAMP
chr2
218264123
218270257
-
AEN
chr15
88621337
88632281
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-103a-3p
chr5
168560904
168560926
-
hsa-miR-146a-5p
chr5
160485372
160485393
+
hsa-miR-1306-3p
chr22
20086112
20086129
+
hsa-miR-4709-5p
chr14
74480175
74480196
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC006511.5
chr12
8014093
8019007
-
AC007952.4
chr17
19112000
19112636
-
AC024940.6
chr12
31280422
31280895
-
AC078883.1
chr2
172480840
172556596
-
AC113189.2
chr17
7420103
7444081
+
AC113189.4
chr17
7439506
7445966
+
AC132217.1
chr11
2129121
2129964
-
AC139149.1
chr17
81514047
81527776
+
AC145207.5
chr17
81878425
81881106
-
AF106564.1
chr8
24912165
24914717
-
AL136985.3
chr1
58715609
58771295
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.