Entry Detail


General Information

Database ID:exR0501889
RNA Name:LCP1
RNA Type:mRNA
Chromosome:chr13
Starnd:-
Coordinate:
Start Site(bp):46125920End Site(bp):46211871
External Links:ENSG00000136167



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCD4
chr14
74285269
74303055
-
AC004922.1
chr7
99325879
99394653
+
AC008982.1
chr19
38817471
38840178
-
AC012254.2
chr18
47108188
47176345
-
AC023055.1
chr12
55757275
55827546
-
ACAP2
chr3
195274745
195443044
-
ACBD5
chr10
27195214
27242130
-
ACP1
chr2
264140
278283
+
ACSS1
chr20
25006230
25058980
-
ACTB
chr7
5527148
5563784
-
ACTBL2
chr5
57480018
57482811
-
ACTG1
chr17
81509971
81523847
-
ACTR3C
chr7
150243916
150323725
-
ADAR
chr1
154582057
154628013
-
ADSL
chr22
40346500
40390463
+
AFG3L2
chr18
12328944
12377227
-
AFTPH
chr2
64524305
64593005
+
AGPAT4
chr6
161129967
161274061
-
AHSA1
chr14
77457870
77469472
+
AKR1A1
chr1
45550543
45570049
+
AL021546.1
chr12
120438198
120460006
+
AL022238.4
chr22
40346529
40410054
+
AL109827.1
chr20
35632340
35674544
-
AL139300.1
chr14
103562962
103685924
+
ALAS1
chr3
52198086
52214327
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-155-5p
chr21
25573983
25574006
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC006064.5
chr12
6510275
6510522
+
AC026202.2
chr3
5156905
5187329
-
AC026202.3
chr3
5187172
5188298
-
AC055860.1
chr11
18000542
18022931
-
AC079781.5
chr7
97851688
97972985
-
AC135048.1
chr16
30948386
30956511
+
AC245014.3
chr1
145281116
145281462
+
AL022311.1
chr22
37876148
37895563
+
AL137058.2
chr13
52600042
52642542
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.