Entry Detail


General Information

Database ID:exR0502441
RNA Name:MARCKS
RNA Type:mRNA
Chromosome:chr6
Starnd:+
Coordinate:
Start Site(bp):113857345End Site(bp):113863475
External Links:ENSG00000277443



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABT1
chr6
26596953
26600739
+
AC009133.6
chr16
29812261
29820092
+
AC010422.3
chr19
12643831
12648397
-
AC011448.1
chr19
19516227
19536076
+
AC048338.1
chr12
122207779
122266423
-
AC087289.3
chr17
75898645
75930129
-
ACKR3
chr2
236567787
236582354
+
ACOT7
chr1
6264269
6394391
-
ADAM15
chr1
155050566
155062775
+
ADAR
chr1
154582057
154628013
-
ADCY1
chr7
45574140
45723116
+
ADD3
chr10
109996368
110135565
+
ADGRA3
chr4
22345071
22516066
-
ADGRL2
chr1
81306160
81992436
+
ADPRHL1
chr13
113399610
113453524
-
AGPAT5
chr8
6708642
6761503
+
ALDH9A1
chr1
165662216
165698863
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-19a-3p
chr13
91350939
91350961
+
hsa-miR-146a-5p
chr5
160485372
160485393
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010478.1
chr5
51372736
51383332
-
AC016394.2
chr10
73252791
73254349
+
AC090114.2
chr7
128524016
128531069
-
AC112907.3
chr3
186781780
186784179
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.