Entry Detail


General Information

Database ID:exR0503697
RNA Name:NPM1
RNA Type:mRNA
Chromosome:chr5
Starnd:+
Coordinate:
Start Site(bp):171387116End Site(bp):171411137
External Links:ENSG00000181163



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC073508.2
chr17
40627356
40665141
-
AL121594.1
chr14
35122549
35317474
+
AC092143.1
chr16
89919165
89936092
+
AC007192.1
chr19
18153158
18178117
+
ACTB
chr7
5527148
5563784
-
ADH5
chr4
99070978
99088801
-
AC138969.1
chr16
16317444
16350590
+
ABCC1
chr16
15949577
16143074
+
AC008982.1
chr19
38817471
38840178
-
AC004922.1
chr7
99325879
99394653
+
AL365205.1
chr6
41780349
41790141
+
ADD1
chr4
2843857
2930076
+
AC126283.2
chr4
109713916
109801999
-
AC005258.1
chr19
2269525
2341172
+
AL031708.1
chr16
1632259
1686715
+
AL139011.2
chr1
160216800
160285130
-
ADAM23
chr2
206443532
206621127
+
ABT1
chr6
26596953
26600739
+
ALDH2
chr12
111766887
111817532
+
AGPAT5
chr8
6708642
6761503
+
ADGRG6
chr6
142301854
142446266
+
AC120057.2
chr17
7240427
7244635
-
ACTG1
chr17
81509971
81523847
-
AHCYL1
chr1
109984765
110023742
+
AACS
chr12
125065434
125143333
+
ADGRD1
chr12
130953907
131141469
+
ALDH18A1
chr10
95605941
95656711
-
ALDH3A2
chr17
19648136
19685760
+
ACTR1A
chr10
102461881
102502712
-
AC010463.1
chr19
17267418
17282966
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-92a-3p
chrX
134169544
134169565
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007218.1
chr16
9666885
9676843
-
AC007952.4
chr17
19112000
19112636
-
AC011498.1
chr19
4457962
4471493
-
AC022140.1
chr5
25404733
25445925
-
AD000090.1
chr19
35557956
35581954
+
AL021707.1
chr22
38739003
38749041
+
AL137003.1
chr6
16764346
16766883
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.