Entry Detail


General Information

Database ID:exR0503877
RNA Name:NUP62
RNA Type:mRNA
Chromosome:chr19
Starnd:-
Coordinate:
Start Site(bp):49906825End Site(bp):49929763
External Links:ENSG00000213024



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABRACL
chr6
139028745
139043302
+
AC007192.1
chr19
18153158
18178117
+
AC010422.3
chr19
12643831
12648397
-
AC011462.1
chr19
41350853
41425001
+
AC068946.2
chr2
219209772
219222738
-
AC138696.1
chr8
143247110
143276403
+
ACAA2
chr18
49782164
49813953
-
ACACA
chr17
37084992
37406836
-
ACADVL
chr17
7217125
7225266
+
ACAP3
chr1
1292390
1309609
-
ACIN1
chr14
23058564
23095614
-
ACSF3
chr16
89088375
89164121
+
ACTB
chr7
5527148
5563784
-
ADGRE5
chr19
14380501
14408725
+
ADGRL1
chr19
14147743
14206187
-
AFF2
chrX
148500617
149000663
+
AGAP3
chr7
151085831
151144436
+
AGO3
chr1
35930718
36072500
+
AKAP8L
chr19
15380050
15419141
-
AKT2
chr19
40230317
40285536
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC002470.2
chr22
20979462
20998121
+
AC004812.2
chr12
120116907
120119000
+
AC073957.2
chr7
1055360
1059261
-
AC091271.1
chr17
59618553
59619714
-
AF131216.3
chr8
11345748
11347502
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.