Entry Detail


General Information

Database ID:exR0504168
RNA Name:PABPC1
RNA Type:mRNA
Chromosome:chr8
Starnd:-
Coordinate:
Start Site(bp):100685816End Site(bp):100722809
External Links:ENSG00000070756



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ALDH18A1
chr10
95605941
95656711
-
AC027796.3
chr17
3585149
3636249
-
ACOX3
chr4
8366282
8440723
-
ABHD14B
chr3
51968510
51983409
-
ADNP2
chr18
80109262
80147523
+
AGPAT5
chr8
6708642
6761503
+
AL022318.4
chr22
39014363
39033276
+
ADH5
chr4
99070978
99088801
-
ALDH1B1
chr9
38392702
38398661
+
ACTL6A
chr3
179562886
179588407
+
ADCY1
chr7
45574140
45723116
+
ADAR
chr1
154582057
154628013
-
AFDN
chr6
167826922
167972023
+
ABT1
chr6
26596953
26600739
+
AC010422.3
chr19
12643831
12648397
-
ACTG1
chr17
81509971
81523847
-
AKAP9
chr7
91940867
92110673
+
AC116366.3
chr5
132410832
132646079
+
AC138811.2
chr16
18788063
18801519
-
ACTB
chr7
5527148
5563784
-
AC011005.1
chr7
129126518
129130793
+
ALDH9A1
chr1
165662216
165698863
-
AHDC1
chr1
27534035
27604431
-
AC010463.1
chr19
17267418
17282966
+
ADAMTS7
chr15
78759206
78811464
-
AFG1L
chr6
108294991
108526796
+
ADAMTSL4
chr1
150549369
150560937
+
AC008982.1
chr19
38817471
38840178
-
AC020909.1
chr19
50415799
50428409
+
AC118549.1
chr1
77562416
77683419
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-4709-5p
chr14
74480175
74480196
-
hsa-miR-3620-5p
chr1
228097285
228097306
+
hsa-miR-7705
chr8
100703002
100703024
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007952.4
chr17
19112000
19112636
-
AC010442.1
chr5
466124
473098
-
AC016876.2
chr17
7581964
7584086
-
AC068473.5
chr18
79677287
79679358
-
AC114271.1
chr19
10333436
10336248
+
AD000090.1
chr19
35557956
35581954
+
AL121985.1
chr1
160670778
160699761
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.