Entry Detail


General Information

Database ID:exR0505122
RNA Name:PPP2R1A
RNA Type:mRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):52190048End Site(bp):52229518
External Links:ENSG00000105568



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCF1
chr6
30571393
30597179
+
ABL1
chr9
130713016
130887675
+
AC006064.6
chr12
6556886
6607367
-
AC008750.8
chr19
51350373
51368099
-
AC010422.3
chr19
12643831
12648397
-
AC245033.1
chr15
82536788
82573194
-
ACADS
chr12
120725774
120740008
+
ACLY
chr17
41866917
41930542
-
ACSS1
chr20
25006230
25058980
-
ACTG1
chr17
81509971
81523847
-
ADAM10
chr15
58588809
58749791
-
ADAMTS13
chr9
133414358
133459402
+
ADAMTSL4
chr1
150549369
150560937
+
ADD3
chr10
109996368
110135565
+
ADH5
chr4
99070978
99088801
-
AEN
chr15
88621337
88632281
+
AKIP1
chr11
8911139
8920084
+
AKIRIN1
chr1
38991276
39006059
+
AL136295.4
chr14
24180395
24190416
-
ALDH18A1
chr10
95605941
95656711
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-625-5p
chr14
65471116
65471136
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007780.1
chr17
68413623
68524949
+
AC008764.6
chr19
16542746
16544814
+
AC016876.2
chr17
7581964
7584086
-
AC019069.1
chr2
74832655
74833987
-
AC020663.1
chr16
4730115
4752565
-
AC026461.1
chr16
56682470
56687807
+
AC079781.5
chr7
97851688
97972985
-
AC132217.1
chr11
2129121
2129964
-
AC245033.4
chr15
82533175
82540008
-
AL021408.1
chr6
132085084
132099279
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.