Entry Detail


General Information

Database ID:exR0506006
RNA Name:RHOA
RNA Type:mRNA
Chromosome:chr3
Starnd:-
Coordinate:
Start Site(bp):49359145End Site(bp):49412998
External Links:ENSG00000067560



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC012254.2
chr18
47108188
47176345
-
AL603832.3
chr1
112702614
112711433
-
AKAP9
chr7
91940867
92110673
+
AC010422.3
chr19
12643831
12648397
-
AC008982.1
chr19
38817471
38840178
-
AC087289.3
chr17
75898645
75930129
-
AL928654.3
chr14
105487199
105492267
+
AC023055.1
chr12
55757275
55827546
-
ABCE1
chr4
145098288
145129524
+
ADIPOR1
chr1
202940826
202958572
-
ADAM10
chr15
58588809
58749791
-
ACAT2
chr6
159762045
159779112
+
AL022238.4
chr22
40346529
40410054
+
AC007192.1
chr19
18153158
18178117
+
AHCY
chr20
34280268
34311802
-
AC008763.3
chr19
7678501
7682854
+
ACTB
chr7
5527148
5563784
-
ADSL
chr22
40346500
40390463
+
ABHD14B
chr3
51968510
51983409
-
ACACA
chr17
37084992
37406836
-
ACIN1
chr14
23058564
23095614
-
ACTG1
chr17
81509971
81523847
-
AL590764.2
chrX
71103987
71111575
-
AC135050.2
chr16
31083439
31094956
-
ADNP2
chr18
80109262
80147523
+
AC245033.1
chr15
82536788
82573194
-
ACTL6A
chr3
179562886
179588407
+
AC027796.3
chr17
3585149
3636249
-
ADCY1
chr7
45574140
45723116
+
AK2
chr1
33007940
33080996
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-122-5p
chr18
58451088
58451109
+
hsa-miR-130b-3p
chr22
21653354
21653375
+
hsa-miR-454-3p
chr17
59137787
59137809
-
hsa-miR-1244
chr2
231713368
231713393
+
hsa-miR-4284
chr7
73711327
73711344
+
hsa-miR-4492
chr11
118910765
118910781
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005062.1
chr7
19918981
20140453
-
AC007952.4
chr17
19112000
19112636
-
AC023509.1
chr12
53441741
53467528
+
AC073050.1
chr2
167293171
167558333
+
AC093227.1
chr19
37728586
37730643
-
AC245033.4
chr15
82533175
82540008
-
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.