Entry Detail


General Information

Database ID:exR0506232
RNA Name:RPL3
RNA Type:mRNA
Chromosome:chr22
Starnd:-
Coordinate:
Start Site(bp):39312882End Site(bp):39320389
External Links:ENSG00000100316



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABLIM1
chr10
114431113
114768061
-
AC046185.1
chr17
63702845
63752097
-
ACSS1
chr20
25006230
25058980
-
AIF1L
chr9
131096476
131123152
+
AC105052.3
chr7
102637049
102671641
-
AKAP11
chr13
42272152
42323261
+
AHCYL1
chr1
109984765
110023742
+
ADK
chr10
74151202
74709963
+
ADORA2A
chr22
24417879
24442357
+
ADCY5
chr3
123282296
123449758
-
ALDOA
chr16
30064164
30070457
+
ADAMTS19
chr5
129460281
129738683
+
AC012254.2
chr18
47108188
47176345
-
ADGRG5
chr16
57542643
57591681
+
AC023055.1
chr12
55757275
55827546
-
AC002985.1
chr19
18907013
18934397
-
AC073508.2
chr17
40627356
40665141
-
AC011448.1
chr19
19516227
19536076
+
AFG3L2
chr18
12328944
12377227
-
ADD1
chr4
2843857
2930076
+
AC018523.2
chr11
14493783
14520344
-
AGBL3
chr7
134986508
135147963
+
AC010422.3
chr19
12643831
12648397
-
ACO2
chr22
41469117
41528989
+
AKR1B1
chr7
134442356
134459284
-
AL136454.1
chr1
192716132
192716653
+
AC129492.3
chr17
8150816
8162975
-
AASDHPPT
chr11
106075501
106098699
+
ACTG1
chr17
81509971
81523847
-
AARSD1
chr17
42950526
42964498
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-3654
chr7
133034860
133034878
-
hsa-miR-4426
chr1
192716333
192716349
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004687.1
chr17
58330884
58332508
-
AC005899.4
chr17
32328441
32329395
+
AC007780.1
chr17
68413623
68524949
+
AC007952.4
chr17
19112000
19112636
-
AC021078.1
chr5
149494314
149504670
-
AC022211.4
chr17
75138416
75141350
-
AC023509.1
chr12
53441741
53467528
+
AC026362.1
chr12
122975320
122982907
+
AC026979.2
chr8
30155830
30156232
-
AC091564.7
chr11
6610883
6616594
-
AC109460.3
chr16
28974804
28990775
+
AC113189.2
chr17
7420103
7444081
+
AC113189.4
chr17
7439506
7445966
+
AC115284.1
chr3
51961212
51974031
-
AC132217.1
chr11
2129121
2129964
-
AC239868.1
chr1
149861271
149862504
+
AC245014.3
chr1
145281116
145281462
+
AD000090.1
chr19
35557956
35581954
+
AL022311.1
chr22
37876148
37895563
+
AL136419.1
chr14
23969931
24051377
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.