Entry Detail


General Information

Database ID:exR0506254
RNA Name:RPLP0
RNA Type:mRNA
Chromosome:chr12
Starnd:-
Coordinate:
Start Site(bp):120196699End Site(bp):120201235
External Links:ENSG00000089157



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC092718.3
chr16
81053587
81096296
-
AC007192.1
chr19
18153158
18178117
+
AC091167.2
chr15
90249556
90272208
+
AC138811.2
chr16
18788063
18801519
-
ACTR3
chr2
113890063
113962596
+
ADGRA3
chr4
22345071
22516066
-
ACTR5
chr20
38748460
38772520
+
AL121594.1
chr14
35122549
35317474
+
AGPAT5
chr8
6708642
6761503
+
AARS2
chr6
44298731
44313347
-
AGPAT3
chr21
43865223
43987592
+
AL132671.2
chr6
117318211
117573571
-
AC010422.3
chr19
12643831
12648397
-
AL022238.4
chr22
40346529
40410054
+
AK3
chr9
4709556
4742043
-
ADNP
chr20
50888916
50931437
-
AC010323.1
chr19
8308283
8321379
-
ABCF1
chr6
30571393
30597179
+
AHCYL1
chr1
109984765
110023742
+
AC011455.2
chr19
38915404
38949855
-
AL136295.1
chr14
24189157
24213473
-
AC011511.1
chr19
10305427
10316009
-
AC006064.6
chr12
6556886
6607367
-
AC005832.4
chr12
4604944
4662643
+
ACTG1
chr17
81509971
81523847
-
AC010463.1
chr19
17267418
17282966
+
AL133352.1
chr10
100505628
100529881
-
AKT1
chr14
104769349
104795751
-
AL928654.3
chr14
105487199
105492267
+
ACAT1
chr11
108116695
108147603
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-3609
chr7
98881700
98881723
+
hsa-miR-4426
chr1
192716333
192716349
+
hsa-miR-6833-3p
chr6
32179856
32179876
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC002470.2
chr22
20979462
20998121
+
AC007952.4
chr17
19112000
19112636
-
AC008937.3
chr5
56927874
56929573
+
AC010542.4
chr16
66549280
66551189
+
AC010642.2
chr19
58309727
58327248
-
AC010655.2
chr7
128455937
128469197
+
AC010655.4
chr7
128455840
128493859
+
AC010733.2
chr2
60925909
60931610
+
AC020910.5
chr19
34733298
34733837
-
AC023509.1
chr12
53441741
53467528
+
AC026362.1
chr12
122975320
122982907
+
AC064802.1
chr8
114282067
114295839
+
AC068768.1
chr12
123262060
123262402
+
AC073896.4
chr12
56162359
56190284
-
AC104109.4
chr5
134205614
134371044
-
AC105036.3
chr15
75527150
75601205
-
AC109460.3
chr16
28974804
28990775
+
AC147651.4
chr7
603185
608482
+
AD000090.1
chr19
35557956
35581954
+
ADD3-AS1
chr10
109940104
110008381
-
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.