Entry Detail


General Information

Database ID:exR0506276
RNA Name:RPS16
RNA Type:mRNA
Chromosome:chr19
Starnd:-
Coordinate:
Start Site(bp):39433137End Site(bp):39435949
External Links:ENSG00000105193



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL928654.3
chr14
105487199
105492267
+
ACTA2
chr10
88935074
88991339
-
ACOT9
chrX
23701055
23766475
-
AC009690.1
chr15
72284727
72375981
-
ACTN4
chr19
38647649
38731589
+
ALDOA
chr16
30064164
30070457
+
ADORA2A
chr22
24417879
24442357
+
ACTL6A
chr3
179562886
179588407
+
AKAP5
chr14
64465499
64474503
+
ADGRG6
chr6
142301854
142446266
+
AC010422.3
chr19
12643831
12648397
-
AICDA
chr12
8602170
8612867
-
AHSA1
chr14
77457870
77469472
+
AL121845.2
chr20
63738270
63740398
+
ACIN1
chr14
23058564
23095614
-
AL121845.3
chr20
63708864
63739103
+
ABCB8
chr7
151028422
151047782
+
ADM
chr11
10305073
10307397
+
ADIPOR2
chr12
1688574
1788674
+
ACO2
chr22
41469117
41528989
+
AEN
chr15
88621337
88632281
+
ACAA2
chr18
49782164
49813953
-
AC010323.1
chr19
8308283
8321379
-
AHCY
chr20
34280268
34311802
-
ADI1
chr2
3497366
3519531
-
AC004922.1
chr7
99325879
99394653
+
ADD1
chr4
2843857
2930076
+
ABCF1
chr6
30571393
30597179
+
AC124312.1
chr15
24955034
25000276
+
AK2
chr1
33007940
33080996
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-492
chr12
94834427
94834449
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC023509.1
chr12
53441741
53467528
+
AC027020.2
chr15
100547765
100550153
-
AC067852.1
chr17
42536510
42562062
+
AC096536.3
chr1
54874672
54883664
+
AC104596.1
chr4
142933195
143184861
-
AC245014.3
chr1
145281116
145281462
+
AD000090.1
chr19
35557956
35581954
+
AL132780.1
chr14
22929607
22956374
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.