Entry Detail


General Information

Database ID:exR0506279
RNA Name:RPS19
RNA Type:mRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):41860255End Site(bp):41872925
External Links:ENSG00000105372



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ACADM
chr1
75724347
75787575
+
ALDOA
chr16
30064164
30070457
+
ACTG1
chr17
81509971
81523847
-
ABCC5
chr3
183919934
184017939
-
AL022238.4
chr22
40346529
40410054
+
AC092143.1
chr16
89919165
89936092
+
AHRR
chr5
271670
438291
+
ADD1
chr4
2843857
2930076
+
ALDH7A1
chr5
126531200
126595362
-
AL136295.4
chr14
24180395
24190416
-
AC011511.1
chr19
10305427
10316009
-
ADA
chr20
44619522
44652233
-
AIFM1
chrX
130129362
130165887
-
AC087289.3
chr17
75898645
75930129
-
ACAD9
chr3
128879596
128916067
+
AL358113.1
chr9
69035747
69255187
+
AKNA
chr9
114334156
114394405
-
AC005258.1
chr19
2269525
2341172
+
AK1
chr9
127866486
127877675
-
ABHD8
chr19
17292131
17310236
-
AC010422.3
chr19
12643831
12648397
-
AKT2
chr19
40230317
40285536
-
AGFG1
chr2
227472152
227561214
+
ACSS2
chr20
34872146
34927962
+
AC026464.4
chr16
69299682
69322700
+
ACOX1
chr17
75941507
75979177
-
AGFG2
chr7
100539203
100568220
+
ADH5
chr4
99070978
99088801
-
AC120057.2
chr17
7240427
7244635
-
AC048338.1
chr12
122207779
122266423
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-130b-5p
chr22
21653316
21653336
+
hsa-miR-4284
chr7
73711327
73711344
+
hsa-miR-6797-3p
chr19
41869675
41869696
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004687.1
chr17
58330884
58332508
-
AC008033.3
chr12
68426331
68427737
-
AC010327.5
chr19
55216660
55221616
+
AC016876.2
chr17
7581964
7584086
-
AC026304.1
chr3
143000907
143001467
-
AC067930.1
chr8
143579636
143580670
+
AC068338.2
chr15
75368155
75369584
+
AC074135.1
chr19
23075201
23100361
+
AC090204.1
chr8
32927913
33045445
+
AC105036.3
chr15
75527150
75601205
-
AC132217.1
chr11
2129121
2129964
-
AC133540.1
chr16
85489813
85490831
+
AC135048.1
chr16
30948386
30956511
+
AC148477.2
chr12
132277349
132280900
+
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.