Entry Detail


General Information

Database ID:exR0506282
RNA Name:RPS23
RNA Type:mRNA
Chromosome:chr5
Starnd:-
Coordinate:
Start Site(bp):82273320End Site(bp):82278396
External Links:ENSG00000186468



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AKIRIN2
chr6
87674860
87702233
-
ABCA1
chr9
104781006
104928155
-
AC105052.1
chr7
102582523
102642869
-
AC137834.1
chr12
57249609
57296484
-
ALDOA
chr16
30064164
30070457
+
ACTN4
chr19
38647649
38731589
+
ACTR2
chr2
65227753
65271253
+
ADNP
chr20
50888916
50931437
-
ABL1
chr9
130713016
130887675
+
AL365205.1
chr6
41780349
41790141
+
AIP
chr11
67483026
67491103
+
AL133352.1
chr10
100505628
100529881
-
ACOT7
chr1
6264269
6394391
-
ACAP2
chr3
195274745
195443044
-
ADAR
chr1
154582057
154628013
-
AC118549.1
chr1
77562416
77683419
-
AC005943.1
chr19
1578339
1605445
-
ADA
chr20
44619522
44652233
-
ALDH7A1
chr5
126531200
126595362
-
AFG3L2
chr18
12328944
12377227
-
AL136295.1
chr14
24189157
24213473
-
ADORA1
chr1
203090654
203167405
+
ACTG1
chr17
81509971
81523847
-
ABCE1
chr4
145098288
145129524
+
AAGAB
chr15
67200667
67255195
-
ADARB1
chr21
45073853
45226560
+
ACSS3
chr12
80936414
81261210
+
ABHD8
chr19
17292131
17310236
-
ABHD10
chr3
111979010
111993368
+
ACTB
chr7
5527148
5563784
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-19a-3p
chr13
91350939
91350961
+
hsa-miR-19b-3p
chr13
91351245
91351267
+
hsa-miR-135b-5p
chr1
205448361
205448383
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007566.1
chr7
92457564
92495601
+
AC010226.1
chr5
115602057
115623897
+
AC010442.1
chr5
466124
473098
-
AC012531.2
chr12
54017110
54035361
+
AC016876.2
chr17
7581964
7584086
-
AC023509.1
chr12
53441741
53467528
+
AC026461.1
chr16
56682470
56687807
+
AC064807.1
chr8
51899268
51949874
+
AC079781.5
chr7
97851688
97972985
-
AC099329.1
chr3
42785087
42852428
-
AC126365.1
chr17
20788071
20789584
+
AC132217.1
chr11
2129121
2129964
-
AD000090.1
chr19
35557956
35581954
+
AL096870.2
chr14
24209646
24215987
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.