Entry Detail


General Information

Database ID:exR0506291
RNA Name:RPS4X
RNA Type:mRNA
Chromosome:chrX
Starnd:-
Coordinate:
Start Site(bp):72255679End Site(bp):72277248
External Links:ENSG00000198034



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AGPAT3
chr21
43865223
43987592
+
ALDOA
chr16
30064164
30070457
+
ACSL3
chr2
222860942
222944639
+
ADAR
chr1
154582057
154628013
-
ACAA1
chr3
38103129
38137242
-
AL022238.4
chr22
40346529
40410054
+
AL136454.1
chr1
192716132
192716653
+
ADSL
chr22
40346500
40390463
+
AKAP13
chr15
85380571
85749358
+
ADTRP
chr6
11712054
11807046
-
ADA2
chr22
17178790
17258235
-
ABCF2
chr7
151207837
151227166
-
AC026464.4
chr16
69299682
69322700
+
AC011530.1
chr19
45779437
45785973
-
AL590764.2
chrX
71103987
71111575
-
AKR1A1
chr1
45550543
45570049
+
AASS
chr7
122073549
122144255
-
AC245033.1
chr15
82536788
82573194
-
ADRM1
chr20
62302093
62308862
+
AC010422.3
chr19
12643831
12648397
-
ACAD9
chr3
128879596
128916067
+
ACKR3
chr2
236567787
236582354
+
AC010132.3
chr7
42909273
42932174
-
AC139530.2
chr17
81703371
81720539
+
ACAT1
chr11
108116695
108147603
+
AC120057.2
chr17
7240427
7244635
-
ACTB
chr7
5527148
5563784
-
ACIN1
chr14
23058564
23095614
-
AC104452.1
chr3
49416777
49429314
-
ACTG1
chr17
81509971
81523847
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-155-5p
chr21
25573983
25574006
+
hsa-miR-3651
chr9
92292461
92292484
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC006511.5
chr12
8014093
8019007
-
AC016876.2
chr17
7581964
7584086
-
AC020663.1
chr16
4730115
4752565
-
AC023509.1
chr12
53441741
53467528
+
AC087190.3
chr16
9104848
9113181
+
AC091564.7
chr11
6610883
6616594
-
AC107959.2
chr8
23068229
23083619
+
AD000090.1
chr19
35557956
35581954
+
AL022311.1
chr22
37876148
37895563
+
AL118506.1
chr20
63861212
63864293
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.