Entry Detail


General Information

Database ID:exR0506306
RNA Name:RPS8
RNA Type:mRNA
Chromosome:chr1
Starnd:+
Coordinate:
Start Site(bp):44775251End Site(bp):44778779
External Links:ENSG00000142937



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ACVR1B
chr12
51951699
51997078
+
AL021546.1
chr12
120438198
120460006
+
AC073508.2
chr17
40627356
40665141
-
AC008758.1
chr19
12461559
12551474
-
ACAT1
chr11
108116695
108147603
+
AC120057.2
chr17
7240427
7244635
-
AC138811.2
chr16
18788063
18801519
-
ADNP
chr20
50888916
50931437
-
AHCYL1
chr1
109984765
110023742
+
AGL
chr1
99850361
99924023
+
ABI3
chr17
49210411
49223225
+
ACTG1
chr17
81509971
81523847
-
ACTR1B
chr2
97655939
97664044
-
ACTA2
chr10
88935074
88991339
-
AL136295.5
chr14
24147548
24166452
+
ABRACL
chr6
139028745
139043302
+
AKIRIN1
chr1
38991276
39006059
+
AKT1
chr14
104769349
104795751
-
ACTA1
chr1
229431245
229434098
-
AL669918.1
chr6
32813767
32838822
-
AHRR
chr5
271670
438291
+
ABCD4
chr14
74285269
74303055
-
AGPAT3
chr21
43865223
43987592
+
AEN
chr15
88621337
88632281
+
AC002985.1
chr19
18907013
18934397
-
AKR7A2
chr1
19303965
19312146
-
ADRM1
chr20
62302093
62308862
+
AC022384.1
chr3
10249372
10285796
+
ADAR
chr1
154582057
154628013
-
ADD1
chr4
2843857
2930076
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-92a-3p
chrX
134169544
134169565
-
hsa-miR-367-3p
chr4
112647877
112647898
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC063949.2
chr12
92421531
92483680
+
AC090772.3
chr18
24159509
24162211
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.