Entry Detail


General Information

Database ID:exR0507058
RNA Name:SLC25A3
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):98593591End Site(bp):98606379
External Links:ENSG00000075415



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABHD17A
chr19
1876810
1885547
-
ABT1
chr6
26596953
26600739
+
AC023055.1
chr12
55757275
55827546
-
AC091167.2
chr15
90249556
90272208
+
AC092835.1
chr2
95207535
95259774
+
AC093525.2
chr16
2496032
2520218
+
AC245033.1
chr15
82536788
82573194
-
ACTA1
chr1
229431245
229434098
-
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACTG2
chr2
73892314
73919865
+
ACTR2
chr2
65227753
65271253
+
ACY1
chr3
51983340
51989197
+
ADIPOR1
chr1
202940826
202958572
-
AHCY
chr20
34280268
34311802
-
AICDA
chr12
8602170
8612867
-
AKAP12
chr6
151239967
151358559
+
AKIRIN1
chr1
38991276
39006059
+
AL117348.2
chr1
225886696
225924278
-
AL355315.1
chr10
97584374
97673910
+
AL355987.1
chr9
136738167
136748453
-
AL358113.1
chr9
69035747
69255187
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-205-5p
chr1
209432166
209432187
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007406.5
chr12
273954
277123
-
AC087239.1
chr12
25385670
25386241
-
AC106886.2
chr16
30740667
30751381
+
AC245014.3
chr1
145281116
145281462
+
AC245033.4
chr15
82533175
82540008
-
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.