Entry Detail


General Information

Database ID:exR0507082
RNA Name:SLC25A6
RNA Type:mRNA
Chromosome:chrX
Starnd:-
Coordinate:
Start Site(bp):1386152End Site(bp):1392113
External Links:ENSG00000169100



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005943.1
chr19
1578339
1605445
-
AC018523.2
chr11
14493783
14520344
-
AHCY
chr20
34280268
34311802
-
ACBD3
chr1
226144679
226186741
-
AK2
chr1
33007940
33080996
-
AC087289.3
chr17
75898645
75930129
-
AL358113.1
chr9
69035747
69255187
+
ACTG1
chr17
81509971
81523847
-
ACLY
chr17
41866917
41930542
-
AC007192.1
chr19
18153158
18178117
+
AL022238.4
chr22
40346529
40410054
+
AC020915.5
chr19
58228914
58315183
+
ACOT7
chr1
6264269
6394391
-
AL133352.1
chr10
100505628
100529881
-
ADGRL2
chr1
81306160
81992436
+
ACTB
chr7
5527148
5563784
-
AC104109.3
chr5
134167170
134226071
-
AKIP1
chr11
8911139
8920084
+
AC245033.1
chr15
82536788
82573194
-
AC091167.2
chr15
90249556
90272208
+
ACVR2B
chr3
38453890
38493142
+
AKT2
chr19
40230317
40285536
-
AC026464.4
chr16
69299682
69322700
+
ALDH18A1
chr10
95605941
95656711
-
ADAR
chr1
154582057
154628013
-
AL109827.1
chr20
35632340
35674544
-
ADPRHL2
chr1
36088892
36093932
+
AC012651.1
chr15
42348103
42412317
+
AC138811.2
chr16
18788063
18801519
-
ACAD9
chr3
128879596
128916067
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-1182
chr1
231019841
231019863
-
hsa-miR-7847-3p
chr11
1880105
1880125
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005899.4
chr17
32328441
32329395
+
AC007773.1
chr19
32390050
32405560
-
AC007952.4
chr17
19112000
19112636
-
AC010331.1
chr19
47607873
47608454
-
AC016355.1
chr15
67541072
67542604
-
AC016876.2
chr17
7581964
7584086
-
AC017083.1
chr2
68252870
68253848
+
AC018521.1
chr17
47945424
47981736
+
AC020663.1
chr16
4730115
4752565
-
AC025181.2
chr5
32174471
32175272
+
AC026362.1
chr12
122975320
122982907
+
AC026803.2
chr19
48963975
48965158
+
AC114271.1
chr19
10333436
10336248
+
AC139149.1
chr17
81514047
81527776
+
AC140125.2
chr5
177782197
177794396
+
AC245014.3
chr1
145281116
145281462
+
AD000090.1
chr19
35557956
35581954
+
AL022311.1
chr22
37876148
37895563
+
AL117378.1
chr6
131901963
131920565
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.