exRNAdisease

Entry Detail

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General Information

Database ID: exR0507542 RNA Name: SOX4 RNA Type: mRNA Chromosome: chr6 Starnd: + Coordinate: Start Site(bp): 21593751 End Site(bp): 21598619 External Links: ENSG00000124766

Disease Information

Disease Name: Lung Cancer Disease Category: Cancers MeSH ID: D008175 Type: Neoplasms/Respiratory Tract Neoplasms Alias: Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung

Expression Detail

GEO ID: GSE32175 Description: Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer Experimental Design: Cancer vs Control Case Disease Type: Lung Cancer Case Disease SubType: NA Case Sample: Lung Cancer Control Sample: Healthy Number of Case: 10 Number of Control: 10 Number of Samples: 20

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC011005.1 chr7 129126518 129130793 + AC131160.1 chr3 183815568 183884889 - AC135050.2 chr16 31083439 31094956 - ACSF3 chr16 89088375 89164121 + ACTR1A chr10 102461881 102502712 - ADGRL1 chr19 14147743 14206187 - AEN chr15 88621337 88632281 + AFDN chr6 167826922 167972023 + AHCYL1 chr1 109984765 110023742 + AKAP9 chr7 91940867 92110673 + AKIRIN2 chr6 87674860 87702233 - AL162417.1 chr9 133098121 133163914 - ALDH16A1 chr19 49453225 49471050 + ALDH1B1 chr9 38392702 38398661 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-25-3p chr7 100093571 100093592 - hsa-miR-92a-3p chrX 134169544 134169565 - hsa-miR-378a-3p chr5 149732867 149732888 + hsa-miR-422a chr15 63870989 63871010 - hsa-miR-92b-3p chr1 155195237 155195258 + hsa-miR-483-5p chr11 2134181 2134202 - hsa-miR-7704 chr2 176188843 176188861 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007637.1 chr12 109111218 109125594 + AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 22689099 Title: Development of transcriptomic biomarker signature in human saliva to detect lung cancer. Author: Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW. Journal: Cell Mol Life Sci. 2012 Oct;69(19):3341-3350. Description: This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.