Entry Detail


General Information

Database ID:exR0507752
RNA Name:SRSF1
RNA Type:mRNA
Chromosome:chr17
Starnd:-
Coordinate:
Start Site(bp):58000919End Site(bp):58007346
External Links:ENSG00000136450



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AASS
chr7
122073549
122144255
-
ABCA7
chr19
1039997
1065572
+
ABHD14A-ACY1
chr3
51974706
51989183
+
AC010422.3
chr19
12643831
12648397
-
AC013394.1
chr15
92883413
92949230
+
AC015813.2
chr17
57989038
58007246
-
AC027796.3
chr17
3585149
3636249
-
AC073082.1
chr2
48632291
48755724
-
AC120057.2
chr17
7240427
7244635
-
AC245033.1
chr15
82536788
82573194
-
ACBD6
chr1
180269653
180502954
-
ACPP
chr3
132317369
132368298
+
ACTB
chr7
5527148
5563784
-
ACTL6A
chr3
179562886
179588407
+
ACTR3
chr2
113890063
113962596
+
ACY1
chr3
51983340
51989197
+
ADPGK
chr15
72751369
72785846
-
AEN
chr15
88621337
88632281
+
AGPAT5
chr8
6708642
6761503
+
AHCY
chr20
34280268
34311802
-
AHSA1
chr14
77457870
77469472
+
AKT2
chr19
40230317
40285536
-
ALDH6A1
chr14
74056847
74084492
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-18a-5p
chr13
91350756
91350778
+
hsa-miR-7705
chr8
100703002
100703024
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC015813.1
chr17
57989039
57994850
-
AC025575.2
chr12
71047402
71118247
-
AC132217.1
chr11
2129121
2129964
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.