Entry Detail


General Information

Database ID:exR0509295
RNA Name:TUBA1C
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):49188736End Site(bp):49274603
External Links:ENSG00000167553



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ADCK2
chr7
140672945
140696261
+
AHCYL1
chr1
109984765
110023742
+
ALDH7A1
chr5
126531200
126595362
-
AC010323.1
chr19
8308283
8321379
-
AL139011.2
chr1
160216800
160285130
-
ADNP2
chr18
80109262
80147523
+
ABR
chr17
1003518
1229738
-
ABCA2
chr9
137007234
137028922
-
ACBD5
chr10
27195214
27242130
-
AC027644.4
chr7
66628958
66811189
+
AC093525.2
chr16
2496032
2520218
+
ACAT2
chr6
159762045
159779112
+
AK9
chr6
109492856
109691217
-
ADORA1
chr1
203090654
203167405
+
AHCY
chr20
34280268
34311802
-
ACTB
chr7
5527148
5563784
-
AGTRAP
chr1
11736084
11754802
+
ACIN1
chr14
23058564
23095614
-
ACTR3
chr2
113890063
113962596
+
AGBL3
chr7
134986508
135147963
+
ACTG1
chr17
81509971
81523847
-
AGK
chr7
141551278
141655244
+
ACTL6A
chr3
179562886
179588407
+
AC008982.1
chr19
38817471
38840178
-
AL162231.3
chr9
34646645
34657113
+
ALDOA
chr16
30064164
30070457
+
AL136454.1
chr1
192716132
192716653
+
AC004922.1
chr7
99325879
99394653
+
AC092143.1
chr16
89919165
89936092
+
ACTR1B
chr2
97655939
97664044
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-367-3p
chr4
112647877
112647898
-
hsa-miR-3610
chr8
116874740
116874759
-
hsa-miR-3654
chr7
133034860
133034878
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004687.1
chr17
58330884
58332508
-
AC011298.1
chr2
240686334
240690414
+
AC026362.1
chr12
122975320
122982907
+
AC233266.2
chr2
91580336
91580863
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.