Entry Detail


General Information

Database ID:exR0509379
RNA Name:UBA52
RNA Type:mRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):18571730End Site(bp):18577550
External Links:ENSG00000221983



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AATF
chr17
36948954
37056871
+
ABRACL
chr6
139028745
139043302
+
AC008763.3
chr19
7678501
7682854
+
AC008982.1
chr19
38817471
38840178
-
AC010422.3
chr19
12643831
12648397
-
AC012254.2
chr18
47108188
47176345
-
AC023055.1
chr12
55757275
55827546
-
AC124312.1
chr15
24955034
25000276
+
AC245033.1
chr15
82536788
82573194
-
ACAT2
chr6
159762045
159779112
+
ACLY
chr17
41866917
41930542
-
ACO1
chr9
32384603
32454769
+
ACSF3
chr16
89088375
89164121
+
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACTR2
chr2
65227753
65271253
+
AD000671.1
chr19
35745678
35754519
+
ADAR
chr1
154582057
154628013
-
ADPGK
chr15
72751369
72785846
-
ADRM1
chr20
62302093
62308862
+
AFF4
chr5
132875395
132963634
-
AHCY
chr20
34280268
34311802
-
AIF1L
chr9
131096476
131123152
+
AIP
chr11
67483026
67491103
+
AL121594.1
chr14
35122549
35317474
+
AL136295.5
chr14
24147548
24166452
+
AL136454.1
chr1
192716132
192716653
+
AL512428.1
chr6
24797373
24809798
-
AL590764.2
chrX
71103987
71111575
-
AL645941.2
chr6
32937364
32953122
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC021078.1
chr5
149494314
149504670
-
AC099329.1
chr3
42785087
42852428
-
AC109460.3
chr16
28974804
28990775
+
AC132217.1
chr11
2129121
2129964
-
AD000090.1
chr19
35557956
35581954
+
AL021368.4
chr6
57919912
57961382
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.