Entry Detail


General Information

Database ID:exR0509453
RNA Name:UBR4
RNA Type:mRNA
Chromosome:chr1
Starnd:-
Coordinate:
Start Site(bp):19074510End Site(bp):19210266
External Links:ENSG00000127481



Disease Information

Disease Name:Lung Cancer
Disease Category:Cancers
MeSH ID:D008175
Type:Neoplasms/Respiratory Tract Neoplasms
Alias:Lung Neoplasms//Pulmonary Neoplasms//Neoplasms, Lung//Lung Neoplasm//Neoplasm, Lung//Neoplasms, Pulmonary//Neoplasm, Pulmonary//Pulmonary Neoplasm//Lung Cancer//Cancer, Lung//Cancers, Lung//Lung Cancers//Pulmonary Cancer//Cancer, Pulmonary//Cancers, Pulmonary//Pulmonary Cancers//Cancer of the Lung//Cancer of Lung



Expression Detail

GEO ID:GSE32175
Description:Development of Transcriptomic Biomarker Signature in Human Saliva to Detect Lung Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Lung Cancer
Case Disease SubType:NA
Case Sample:Lung Cancer
Control Sample:Healthy
Number of Case:10
Number of Control:10
Number of Samples:20





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCF1
chr6
30571393
30597179
+
ABHD13
chr13
108218392
108234243
+
ABI2
chr2
203328239
203447728
+
ABL2
chr1
179099330
179229684
-
AC093525.2
chr16
2496032
2520218
+
AC138894.1
chr16
28456371
28492098
-
ACD
chr16
67657512
67660815
-
ACIN1
chr14
23058564
23095614
-
ACTB
chr7
5527148
5563784
-
ADORA2A
chr22
24417879
24442357
+
AFG3L2
chr18
12328944
12377227
-
AGAP3
chr7
151085831
151144436
+
AGO2
chr8
140520156
140635633
-
AHCY
chr20
34280268
34311802
-
AK7
chr14
96392128
96489427
+
AKAP13
chr15
85380571
85749358
+
AL138752.2
chr9
37588413
38068687
-
AL139300.1
chr14
103562962
103685924
+
AL357673.1
chr1
54132686
54200073
-
AL513165.2
chr9
37512547
37592469
-
ALCAM
chr3
105366909
105576900
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-3620-3p
chr1
228097320
228097341
+
hsa-miR-5100
chr10
42997630
42997651
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
A1BG-AS1
chr19
58347718
58355455
+
AC109460.3
chr16
28974804
28990775
+
AD000090.1
chr19
35557956
35581954
+
AL096870.2
chr14
24209646
24215987
-
AL137127.1
chr1
19072110
19075511
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22689099
Title:Development of transcriptomic biomarker signature in human saliva to detect lung cancer.
Author:Zhang L(#), Xiao H(#), Zhou H, Santiago S, Lee JM, Garon EB,Yang J, Brinkmann O, Yan X, Akin D, Chia D, Elashoff D, ParkNH, Wong DTW.
Journal:Cell Mol Life Sci. 2012 Oct;69(19):3341-3350.
Description:This report provides theproof of concept of salivary biomarkers for the non-invasive detection of thesystematic disease.