Entry Detail


General Information

Database ID:exR0510748
RNA Name:ABAT
RNA Type:mRNA
Chromosome:chr16
Starnd:+
Coordinate:
Start Site(bp):8674596End Site(bp):8784575
External Links:ENSG00000183044



Disease Information

Disease Name:Lactation
Disease Category:Other Diseases
MeSH ID:D007774
Type:Phenomena and Processes Category/Reproductive and Urinary Physiological Phenomena
Alias:Milk Secretion//Milk Secretions//Lactation, Prolonged//Lactations, Prolonged//Prolonged Lactation//Prolonged Lactations



Expression Detail

GEO ID:GSE36936
Description:Gene Expression in the Human Mammary Epithelium during Initiation of Lactation.
Experimental Design:Time Series
Case Disease Type:Lactation
Case Disease SubType:NA
Case Sample:12h post delivery
Control Sample:6h post delivery
Number of Case:7
Number of Control:7
Number of Samples:14





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ARFIP2
chr11
6474683
6481479
-
BTNL9
chr5
181040225
181061521
+
ESRP1
chr8
94641074
94707466
+
HNRNPA1P48
chr16
51553436
51647132
+
LSM14B
chr20
62122461
62135374
+
MEA1
chr6
43011143
43016868
-
PTCD2
chr5
72320367
72368395
+
RHBDF2
chr17
76470891
76501790
-
RPS28
chr19
8321158
8323340
+
RPS6
chr9
19375715
19380236
-
SENP6
chr6
75601509
75718281
+
SNRPD2
chr19
45687454
45692569
-
SP2
chr17
47896150
47928957
+
SPTLC1
chr9
92000087
92115413
-
TMEM9
chr1
201134772
201171574
-
USP7
chr16
8892097
8975328
-
ZBTB11
chr3
101648889
101677132
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-485-5p
chr14
101055427
101055448
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
ALDH1L1-AS2
chr3
126180012
126210169
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22649065
Title:Gene regulation of UDP-galactose synthesis and transport: potential rate-limiting processes in initiation of milk production in humans
Author:Mohammad MA, Hadsell DL, Haymond MW.
Journal:Am J Physiol Endocrinol Metab. 2012 Aug 1;303(3):E365-76.
Description:We have utilized our established model of the RNA isolated from breast milk fat globule from seven healthy, exclusively breastfeeding women from 6 h to 42 days following delivery to determine the temporal coordination of changes in gene expression in the carbohydrate metabolic processes emphasizing the lactose synthesis pathway in human mammary epithelial cell.