Entry Detail


General Information

Database ID:exR0510825
RNA Name:ACAD9
RNA Type:mRNA
Chromosome:chr3
Starnd:+
Coordinate:
Start Site(bp):128879596End Site(bp):128916067
External Links:ENSG00000177646



Disease Information

Disease Name:Lactation
Disease Category:Other Diseases
MeSH ID:D007774
Type:Phenomena and Processes Category/Reproductive and Urinary Physiological Phenomena
Alias:Milk Secretion//Milk Secretions//Lactation, Prolonged//Lactations, Prolonged//Prolonged Lactation//Prolonged Lactations



Expression Detail

GEO ID:GSE36936
Description:Gene Expression in the Human Mammary Epithelium during Initiation of Lactation.
Experimental Design:Time Series
Case Disease Type:Lactation
Case Disease SubType:NA
Case Sample:12h post delivery
Control Sample:6h post delivery
Number of Case:7
Number of Control:7
Number of Samples:14





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ATP5F1E
chr20
59025475
59032345
-
AC138811.2
chr16
18788063
18801519
-
GNA12
chr7
2728105
2844308
-
MAVS
chr20
3846799
3876123
+
TGS1
chr8
55773446
55826445
+
RPS4X
chrX
72255679
72277248
-
CABIN1
chr22
24011192
24178628
+
SLC30A9
chr4
41990502
42090461
+
SRSF7
chr2
38743599
38751494
-
RPS13
chr11
17074388
17077715
-
MIB2
chr1
1615415
1630610
+
EDARADD
chr1
236348257
236502915
+
ARFIP1
chr4
152779937
152918463
+
EI24
chr11
125569280
125584684
+
RPS25
chr11
119015712
119018691
-
GTF3C2
chr2
27325849
27357034
-
ATP6V1F
chr7
128862856
128865847
+
SLC36A1
chr5
151437046
151492379
+
RBMX
chrX
136848004
136880764
-
MT-ND2
chrMT
4470
5511
+
B2M
chr15
44711487
44718877
+
TOB1
chr17
50862223
50867978
-
ZNF551
chr19
57681969
57717301
+
PEBP1
chr12
118136124
118145584
+
ATP5MC2
chr12
53632726
53677408
-
EEF2
chr19
3976056
3985463
-
VIPAS39
chr14
77426675
77457952
-
SLC18A2
chr10
117241093
117279430
+
MID1IP1
chrX
38801432
38806537
+
SNRNP200
chr2
96274338
96321271
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22649065
Title:Gene regulation of UDP-galactose synthesis and transport: potential rate-limiting processes in initiation of milk production in humans
Author:Mohammad MA, Hadsell DL, Haymond MW.
Journal:Am J Physiol Endocrinol Metab. 2012 Aug 1;303(3):E365-76.
Description:We have utilized our established model of the RNA isolated from breast milk fat globule from seven healthy, exclusively breastfeeding women from 6 h to 42 days following delivery to determine the temporal coordination of changes in gene expression in the carbohydrate metabolic processes emphasizing the lactose synthesis pathway in human mammary epithelial cell.