Entry Detail


General Information

Database ID:exR0511026
RNA Name:AEBP2
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):19404045End Site(bp):19720801
External Links:ENSG00000139154



Disease Information

Disease Name:Lactation
Disease Category:Other Diseases
MeSH ID:D007774
Type:Phenomena and Processes Category/Reproductive and Urinary Physiological Phenomena
Alias:Milk Secretion//Milk Secretions//Lactation, Prolonged//Lactations, Prolonged//Prolonged Lactation//Prolonged Lactations



Expression Detail

GEO ID:GSE36936
Description:Gene Expression in the Human Mammary Epithelium during Initiation of Lactation.
Experimental Design:Time Series
Case Disease Type:Lactation
Case Disease SubType:NA
Case Sample:12h post delivery
Control Sample:6h post delivery
Number of Case:7
Number of Control:7
Number of Samples:14





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
DDX55
chr12
123602077
123620943
+
NCKAP1
chr2
182909115
183038858
-
AC092329.3
chr19
23222755
23274221
-
FUS
chr16
31180110
31194871
+
HLA-F
chr6
29722775
29738528
+
EMD
chrX
154379273
154381523
+
MT-CO2
chrMT
7586
8269
+
MSH5-SAPCD1
chr6
31740020
31764851
+
BLOC1S2
chr10
100273280
100286680
-
RAB11FIP4
chr17
31391675
31538211
+
NYNRIN
chr14
24399003
24419283
+
ZNF724
chr19
23221599
23250390
-
RPS28
chr19
8321158
8323340
+
IRF2BPL
chr14
77024543
77028708
-
RACK1
chr5
181236897
181248096
-
TTC9
chr14
70641916
70675366
+
SAP18
chr13
21140514
21149084
+
OCIAD1
chr4
48805212
48861817
+
YBX1
chr1
42682418
42703805
+
RHOBTB3
chr5
95713522
95824383
+
NDUFB10
chr16
1959538
1961975
+
HMGCR
chr5
75336329
75362101
+
NCS1
chr9
130172404
130237303
+
TMEM43
chr3
14124940
14143679
+
HNRNPA2B1
chr7
26173057
26201529
-
COPB2
chr3
139355600
139389680
-
NETO1
chr18
72742314
72868146
-
RPL28
chr19
55385345
55403250
+
RASGEF1C
chr5
180100795
180209211
-
DNAJB11
chr3
186567403
186585800
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL139260.2
chr1
38839333
38874494
-
AL139819.1
chr10
100335563
100346390
-
AL357078.2
chr1
65003470
65004087
-
LINC01694
chr21
45593654
45603088
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22649065
Title:Gene regulation of UDP-galactose synthesis and transport: potential rate-limiting processes in initiation of milk production in humans
Author:Mohammad MA, Hadsell DL, Haymond MW.
Journal:Am J Physiol Endocrinol Metab. 2012 Aug 1;303(3):E365-76.
Description:We have utilized our established model of the RNA isolated from breast milk fat globule from seven healthy, exclusively breastfeeding women from 6 h to 42 days following delivery to determine the temporal coordination of changes in gene expression in the carbohydrate metabolic processes emphasizing the lactose synthesis pathway in human mammary epithelial cell.