Entry Detail


General Information

Database ID:exR0513346
RNA Name:CNBP
RNA Type:mRNA
Chromosome:chr3
Starnd:-
Coordinate:
Start Site(bp):129169484End Site(bp):129183922
External Links:ENSG00000169714



Disease Information

Disease Name:Lactation
Disease Category:Other Diseases
MeSH ID:D007774
Type:Phenomena and Processes Category/Reproductive and Urinary Physiological Phenomena
Alias:Milk Secretion//Milk Secretions//Lactation, Prolonged//Lactations, Prolonged//Prolonged Lactation//Prolonged Lactations



Expression Detail

GEO ID:GSE36936
Description:Gene Expression in the Human Mammary Epithelium during Initiation of Lactation.
Experimental Design:Time Series
Case Disease Type:Lactation
Case Disease SubType:NA
Case Sample:12h post delivery
Control Sample:6h post delivery
Number of Case:7
Number of Control:7
Number of Samples:14





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABHD17C
chr15
80679684
80755621
+
ABR
chr17
1003518
1229738
-
AC023055.1
chr12
55757275
55827546
-
AC040162.1
chr16
67929614
67936017
-
AC048338.1
chr12
122207779
122266423
-
AC104472.3
chr3
155763043
155854442
-
AC116366.3
chr5
132410832
132646079
+
ACTA2
chr10
88935074
88991339
-
ACTB
chr7
5527148
5563784
-
ACTN4
chr19
38647649
38731589
+
ADIPOR1
chr1
202940826
202958572
-
ADIPOR2
chr12
1688574
1788674
+
ADNP2
chr18
80109262
80147523
+
ADO
chr10
62804720
62808479
+
ADSL
chr22
40346500
40390463
+
AEN
chr15
88621337
88632281
+
AFAP1L1
chr5
149271859
149343637
+
AFF1
chr4
86935002
87141054
+
AGAP4
chr10
45825594
45853875
-
AGPAT3
chr21
43865223
43987592
+
AICDA
chr12
8602170
8612867
-
AJUBA
chr14
22971177
22982551
-
AL022238.4
chr22
40346529
40410054
+
AL035078.4
chr11
31812391
32104665
+
AL603832.3
chr1
112702614
112711433
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-345-5p
chr14
100307876
100307897
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005062.1
chr7
19918981
20140453
-
AC009084.1
chr16
66942712
66963256
+
AC009133.5
chr16
29808679
29812227
+
AC087190.3
chr16
9104848
9113181
+
AC099329.1
chr3
42785087
42852428
-
AC104109.4
chr5
134205614
134371044
-
AL096870.2
chr14
24209646
24215987
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22649065
Title:Gene regulation of UDP-galactose synthesis and transport: potential rate-limiting processes in initiation of milk production in humans
Author:Mohammad MA, Hadsell DL, Haymond MW.
Journal:Am J Physiol Endocrinol Metab. 2012 Aug 1;303(3):E365-76.
Description:We have utilized our established model of the RNA isolated from breast milk fat globule from seven healthy, exclusively breastfeeding women from 6 h to 42 days following delivery to determine the temporal coordination of changes in gene expression in the carbohydrate metabolic processes emphasizing the lactose synthesis pathway in human mammary epithelial cell.