Entry Detail


General Information

Database ID:exR0720019
RNA Name:RPL13
RNA Type:mRNA
Chromosome:chr16
Starnd:+
Coordinate:
Start Site(bp):89560657End Site(bp):89566828
External Links:ENSG00000167526



Disease Information

Disease Name:Lactation
Disease Category:Other Diseases
MeSH ID:D007774
Type:Phenomena and Processes Category/Reproductive and Urinary Physiological Phenomena
Alias:Milk Secretion//Milk Secretions//Lactation, Prolonged//Lactations, Prolonged//Prolonged Lactation//Prolonged Lactations



Expression Detail

GEO ID:GSE36936
Description:Gene Expression in the Human Mammary Epithelium during Initiation of Lactation.
Experimental Design:Time Series
Case Disease Type:Lactation
Case Disease SubType:NA
Case Sample:Day 42 post delivery
Control Sample:6h post delivery
Number of Case:7
Number of Control:7
Number of Samples:14





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AGFG2
chr7
100539203
100568220
+
AC009690.1
chr15
72284727
72375981
-
ADO
chr10
62804720
62808479
+
AC008763.2
chr19
7629796
7643048
+
ALDH5A1
chr6
24494867
24537207
+
AK4
chr1
65147549
65232145
+
AGAP1
chr2
235494043
236131800
+
AAAS
chr12
53307456
53324864
-
AL136454.1
chr1
192716132
192716653
+
AL590132.1
chr1
210858125
211134146
-
ACTB
chr7
5527148
5563784
-
AC011455.2
chr19
38915404
38949855
-
ACAT2
chr6
159762045
159779112
+
ABCD3
chr1
94418389
94518666
+
AHCYL1
chr1
109984765
110023742
+
AK2
chr1
33007940
33080996
-
ACP1
chr2
264140
278283
+
AC004922.1
chr7
99325879
99394653
+
ADPRHL2
chr1
36088892
36093932
+
AARS2
chr6
44298731
44313347
-
AC006030.1
chr2
74211604
74363377
-
AIFM2
chr10
70098223
70132934
-
ACADM
chr1
75724347
75787575
+
AC026464.4
chr16
69299682
69322700
+
ADCY3
chr2
24819169
24919839
-
ACTR3
chr2
113890063
113962596
+
ADPGK
chr15
72751369
72785846
-
ACOT7
chr1
6264269
6394391
-
AKIRIN1
chr1
38991276
39006059
+
ALDH2
chr12
111766887
111817532
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-29c-3p
chr1
207801865
207801886
-
hsa-miR-4426
chr1
192716333
192716349
+
hsa-miR-4485-3p
chr11
10508277
10508296
-
hsa-miR-4521
chr17
8186948
8186969
+
hsa-miR-6716-3p
chr11
118644048
118644069
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC002116.1
chr19
36008638
36014235
-
AC007952.4
chr17
19112000
19112636
-
AC009022.1
chr16
69976297
70065948
-
AC010542.4
chr16
66549280
66551189
+
AC011632.1
chr8
74798784
74866939
-
AC016747.1
chr2
61141592
61144969
-
AC020928.2
chr19
36773712
36775908
-
AC026362.1
chr12
122975320
122982907
+
AC026401.3
chr16
15701237
15702118
+
AC068768.1
chr12
123262060
123262402
+
AC091564.7
chr11
6610883
6616594
-
AC092143.3
chr16
89906157
89918233
+
AC100810.1
chr8
1761054
1764508
-
AC132217.1
chr11
2129121
2129964
-
AC133644.3
chr2
87455476
87767359
+
AC139149.1
chr17
81514047
81527776
+
AC215522.2
chr7
19018
35489
-
AC245014.3
chr1
145281116
145281462
+
AC245033.4
chr15
82533175
82540008
-
AD000090.1
chr19
35557956
35581954
+
AF106564.1
chr8
24912165
24914717
-
AL022311.1
chr22
37876148
37895563
+
AL022341.1
chr16
648473
649200
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22649065
Title:Gene regulation of UDP-galactose synthesis and transport: potential rate-limiting processes in initiation of milk production in humans
Author:Mohammad MA, Hadsell DL, Haymond MW.
Journal:Am J Physiol Endocrinol Metab. 2012 Aug 1;303(3):E365-76.
Description:We have utilized our established model of the RNA isolated from breast milk fat globule from seven healthy, exclusively breastfeeding women from 6 h to 42 days following delivery to determine the temporal coordination of changes in gene expression in the carbohydrate metabolic processes emphasizing the lactose synthesis pathway in human mammary epithelial cell.