Entry Detail


General Information

Database ID:exR0720086
RNA Name:RPS16
RNA Type:mRNA
Chromosome:chr19
Starnd:-
Coordinate:
Start Site(bp):39433137End Site(bp):39435949
External Links:ENSG00000105193



Disease Information

Disease Name:Lactation
Disease Category:Other Diseases
MeSH ID:D007774
Type:Phenomena and Processes Category/Reproductive and Urinary Physiological Phenomena
Alias:Milk Secretion//Milk Secretions//Lactation, Prolonged//Lactations, Prolonged//Prolonged Lactation//Prolonged Lactations



Expression Detail

GEO ID:GSE36936
Description:Gene Expression in the Human Mammary Epithelium during Initiation of Lactation.
Experimental Design:Time Series
Case Disease Type:Lactation
Case Disease SubType:NA
Case Sample:Day 42 post delivery
Control Sample:6h post delivery
Number of Case:7
Number of Control:7
Number of Samples:14





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL928654.3
chr14
105487199
105492267
+
ACTA2
chr10
88935074
88991339
-
ACOT9
chrX
23701055
23766475
-
AC009690.1
chr15
72284727
72375981
-
ACTN4
chr19
38647649
38731589
+
ALDOA
chr16
30064164
30070457
+
ADORA2A
chr22
24417879
24442357
+
ACTL6A
chr3
179562886
179588407
+
AKAP5
chr14
64465499
64474503
+
ADGRG6
chr6
142301854
142446266
+
AC010422.3
chr19
12643831
12648397
-
AICDA
chr12
8602170
8612867
-
AHSA1
chr14
77457870
77469472
+
AL121845.2
chr20
63738270
63740398
+
ACIN1
chr14
23058564
23095614
-
AL121845.3
chr20
63708864
63739103
+
ABCB8
chr7
151028422
151047782
+
ADM
chr11
10305073
10307397
+
ADIPOR2
chr12
1688574
1788674
+
ACO2
chr22
41469117
41528989
+
AEN
chr15
88621337
88632281
+
ACAA2
chr18
49782164
49813953
-
AC010323.1
chr19
8308283
8321379
-
AHCY
chr20
34280268
34311802
-
ADI1
chr2
3497366
3519531
-
AC004922.1
chr7
99325879
99394653
+
ADD1
chr4
2843857
2930076
+
ABCF1
chr6
30571393
30597179
+
AC124312.1
chr15
24955034
25000276
+
AK2
chr1
33007940
33080996
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-492
chr12
94834427
94834449
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC023509.1
chr12
53441741
53467528
+
AC027020.2
chr15
100547765
100550153
-
AC067852.1
chr17
42536510
42562062
+
AC096536.3
chr1
54874672
54883664
+
AC104596.1
chr4
142933195
143184861
-
AC245014.3
chr1
145281116
145281462
+
AD000090.1
chr19
35557956
35581954
+
AL132780.1
chr14
22929607
22956374
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22649065
Title:Gene regulation of UDP-galactose synthesis and transport: potential rate-limiting processes in initiation of milk production in humans
Author:Mohammad MA, Hadsell DL, Haymond MW.
Journal:Am J Physiol Endocrinol Metab. 2012 Aug 1;303(3):E365-76.
Description:We have utilized our established model of the RNA isolated from breast milk fat globule from seven healthy, exclusively breastfeeding women from 6 h to 42 days following delivery to determine the temporal coordination of changes in gene expression in the carbohydrate metabolic processes emphasizing the lactose synthesis pathway in human mammary epithelial cell.