Entry Detail


General Information

Database ID:exR0721151
RNA Name:SNRPB
RNA Type:mRNA
Chromosome:chr20
Starnd:-
Coordinate:
Start Site(bp):2461634End Site(bp):2470853
External Links:ENSG00000125835



Disease Information

Disease Name:Lactation
Disease Category:Other Diseases
MeSH ID:D007774
Type:Phenomena and Processes Category/Reproductive and Urinary Physiological Phenomena
Alias:Milk Secretion//Milk Secretions//Lactation, Prolonged//Lactations, Prolonged//Prolonged Lactation//Prolonged Lactations



Expression Detail

GEO ID:GSE36936
Description:Gene Expression in the Human Mammary Epithelium during Initiation of Lactation.
Experimental Design:Time Series
Case Disease Type:Lactation
Case Disease SubType:NA
Case Sample:Day 42 post delivery
Control Sample:6h post delivery
Number of Case:7
Number of Control:7
Number of Samples:14





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005258.1
chr19
2269525
2341172
+
AC007192.1
chr19
18153158
18178117
+
AC010422.3
chr19
12643831
12648397
-
AC091551.1
chr18
50968019
51058144
+
AC093525.2
chr16
2496032
2520218
+
AC097637.1
chr3
52221081
52231190
-
AC124312.1
chr15
24955034
25000276
+
ACACA
chr17
37084992
37406836
-
ACIN1
chr14
23058564
23095614
-
ACSF3
chr16
89088375
89164121
+
ACTB
chr7
5527148
5563784
-
ACTC1
chr15
34790230
34795549
-
ADAM10
chr15
58588809
58749791
-
ADRA2C
chr4
3766348
3768526
+
AGRN
chr1
1020120
1056118
+
AKR1A1
chr1
45550543
45570049
+
AL121845.3
chr20
63708864
63739103
+
AL365205.1
chr6
41780349
41790141
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005618.1
chr5
141326210
141329357
+
AC016876.2
chr17
7581964
7584086
-
AC026362.1
chr12
122975320
122982907
+
AC079781.5
chr7
97851688
97972985
-
AC091564.7
chr11
6610883
6616594
-
AC109460.3
chr16
28974804
28990775
+
AL021707.1
chr22
38739003
38749041
+
AL023803.2
chr20
38955910
38956547
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22649065
Title:Gene regulation of UDP-galactose synthesis and transport: potential rate-limiting processes in initiation of milk production in humans
Author:Mohammad MA, Hadsell DL, Haymond MW.
Journal:Am J Physiol Endocrinol Metab. 2012 Aug 1;303(3):E365-76.
Description:We have utilized our established model of the RNA isolated from breast milk fat globule from seven healthy, exclusively breastfeeding women from 6 h to 42 days following delivery to determine the temporal coordination of changes in gene expression in the carbohydrate metabolic processes emphasizing the lactose synthesis pathway in human mammary epithelial cell.