Entry Detail



General Information

Database ID:exR0724437
RNA Name:hsa-miR-199b-3p
RNA Type:miRNA
Chromosome:chr9
Starnd:-
Coordinate:
Start Site(bp):128244745End Site(bp):128244766
External Links:hsa-miR-199b-3p



Disease Information

Disease Name:Vasectomy
Disease Category:Other Diseases
MeSH ID:D014659
Type:Analytical, Diagnostic and Therapeutic Techniques and Equipment Category/Surgical Procedures, Operative
Alias:Vasectomies//Vas Ligation//Ligation, Vas//Ligations, Vas//Vas Ligations//Vas Occlusion//Occlusion, Vas//Occlusions, Vas//Vas Occlusions//Vasectomy Seekers//Seeker, Vasectomy//Seekers, Vasectomy//Vasectomy Seeker//Vasectomy Seekers, Refused//Refused Vasectomy Seeker//Refused Vasectomy Seekers//Seeker, Refused Vasectomy//Seekers, Refused Vasectomy//Vasectomy Seeker, Refused//Intravasal Thread//Intravasal Threads//Thread, Intravasal//Threads, Intravasal//Vas Occlusion, Nonchemical//Nonchemical Vas Occlusion//Nonchemical Vas Occlusions//Occlusion, Nonchemical Vas//Occlusions, Nonchemical Vas//Vas Occlusions, Nonchemical



Expression Detail

GEO ID:GSE43676
Description:microRNA signature is altered in both human epididymis and seminal microvesicles following vasectomy.
Experimental Design:Vasectomy
Case Disease Type:Vasectomized
Case Disease SubType:NA
Case Sample:Vasectomized
Control Sample:Normal
Number of Case:1
Number of Control:1
Number of Samples:2





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AP3B1
chr5
78000525
78294755
-
DUSP5
chr10
110497907
110511533
+
E2F3
chr6
20401879
20493714
+
EMP1
chr12
13196723
13219941
+
PDXDC1
chr16
14974591
15139339
+
RBM23
chr14
22893204
22919182
-
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000591
chr15
41961025
41962156
+
hsa_circ_0001731
chr7
100731990
100738448
+
hsa_circ_0000311
chr11
61205096
61205585
+
hsa_circ_0001865
chr9
86292641
86293514
-
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005082.1
chr7
23205787
23208045
+
AC005165.1
chr7
25593304
25751032
-
AC010542.4
chr16
66549280
66551189
+
AC021078.1
chr5
149494314
149504670
-
AC079781.5
chr7
97851688
97972985
-
AL122035.1
chr14
64422935
64448557
-
AL358472.3
chr1
153966516
153966930
+
MALAT1
chr11
65497688
65506516
+
MIR200CHG
chr12
6963246
6964447
+
NEAT1
chr11
65422774
65445540
+
NORAD
chr20
36045618
36051018
-
OIP5-AS1
chr15
41283990
41309737
+
OTUD6B-AS1
chr8
91059318
91070583
-
SCARNA9
chr11
93721513
93721865
+
SNHG1
chr11
62851984
62855953
-
TUG1
chr22
30969245
30979395
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:23539611
Title:microRNA signature is altered in both human epididymis and seminal microvesicles following vasectomy.
Author:Belleann¨¦e C, L¨¦gar¨¦ C, Calvo E, Thimon V, Sullivan R.
Journal:Hum Reprod. 2013 Jun;28(6):1455-67.
Description:This study may provide new tools for predicting vasovasostomy success and openavenues for the identification of the molecular players involved in male infertility.