Entry Detail



General Information

Database ID:exR0724465
RNA Name:hsa-miR-20b-5p
RNA Type:miRNA
Chromosome:chrX
Starnd:-
Coordinate:
Start Site(bp):134169850End Site(bp):134169872
External Links:hsa-miR-20b-5p



Disease Information

Disease Name:Vasectomy
Disease Category:Other Diseases
MeSH ID:D014659
Type:Analytical, Diagnostic and Therapeutic Techniques and Equipment Category/Surgical Procedures, Operative
Alias:Vasectomies//Vas Ligation//Ligation, Vas//Ligations, Vas//Vas Ligations//Vas Occlusion//Occlusion, Vas//Occlusions, Vas//Vas Occlusions//Vasectomy Seekers//Seeker, Vasectomy//Seekers, Vasectomy//Vasectomy Seeker//Vasectomy Seekers, Refused//Refused Vasectomy Seeker//Refused Vasectomy Seekers//Seeker, Refused Vasectomy//Seekers, Refused Vasectomy//Vasectomy Seeker, Refused//Intravasal Thread//Intravasal Threads//Thread, Intravasal//Threads, Intravasal//Vas Occlusion, Nonchemical//Nonchemical Vas Occlusion//Nonchemical Vas Occlusions//Occlusion, Nonchemical Vas//Occlusions, Nonchemical Vas//Vas Occlusions, Nonchemical



Expression Detail

GEO ID:GSE43676
Description:microRNA signature is altered in both human epididymis and seminal microvesicles following vasectomy.
Experimental Design:Vasectomy
Case Disease Type:Vasectomized
Case Disease SubType:NA
Case Sample:Vasectomized
Control Sample:Normal
Number of Case:1
Number of Control:1
Number of Samples:2





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
RIT1
chr1
155897808
155911404
-
CHD2
chr15
92900189
93027996
+
ARMC8
chr3
138187248
138298384
+
MAGI3
chr1
113390515
113685923
+
RPUSD3
chr3
9837849
9844602
-
KLF3
chr4
38664197
38701517
+
CYLD
chr16
50742050
50801935
+
WASF3
chr13
26557683
26688948
+
PLEKHM1
chr17
45435900
45490749
-
ATXN1
chr6
16299112
16761491
-
NSD2
chr4
1871393
1982207
+
CHD9
chr16
53055033
53329150
+
STRIP1
chr1
110031577
110074641
+
FCF1
chr14
74713144
74738620
+
SMYD3
chr1
245749342
246507312
-
PXYLP1
chr3
141228726
141367753
+
DNAJC27
chr2
24943636
24972094
-
EEF2
chr19
3976056
3985463
-
AMPD2
chr1
109616104
109632053
+
LONP2
chr16
48244300
48363122
+
C9orf40
chr9
74946583
74952912
-
NAA16
chr13
41311267
41377030
+
CRCP
chr7
66114604
66154568
+
CUL1
chr7
148697914
148801110
+
MTHFR
chr1
11785723
11806455
-
PXDN
chr2
1631887
1744852
-
ZNF468
chr19
52838010
52857649
-
EAPP
chr14
34515938
34539711
-
IKZF2
chr2
212999691
213152427
-
SENP1
chr12
48042897
48106079
-
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0001495
chr5
68470703
68471364
+
hsa_circ_0000494
chr13
76134888
76143643
+
hsa_circ_0000018
chr1
15860731
15863309
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC015871.3
chr15
79920195
79922455
-
AC021078.1
chr5
149494314
149504670
-
AC021092.1
chr19
44103007
44113183
-
AC024940.6
chr12
31280422
31280895
-
AC084082.1
chr8
66112667
66126632
+
AC087477.2
chr15
96354237
96405235
+
AC243964.3
chr19
44631573
44725217
-
AL031428.1
chr1
23020147
23088058
-
AL137782.1
chr13
75549773
75807120
+
AL158206.1
chr9
19453209
19455173
+
AL161772.1
chr13
20699307
20703718
-
ARHGAP27P1-BPTFP1-KPNA2P3
chr17
64749663
64781707
-
CKMT2-AS1
chr5
81201341
81301565
-
EPB41L4A-AS1
chr5
112160526
112164818
+
ERICD
chr8
140636281
140638283
+
FGD5-AS1
chr3
14920347
14948424
-
H19
chr11
1995176
2001470
-
HAGLR
chr2
176164051
176188958
-
HOTAIR
chr12
53962308
53974956
-
MALAT1
chr11
65497688
65506516
+
NEAT1
chr11
65422774
65445540
+
NORAD
chr20
36045618
36051018
-
SNHG16
chr17
76557764
76565348
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:23539611
Title:microRNA signature is altered in both human epididymis and seminal microvesicles following vasectomy.
Author:Belleann¨¦e C, L¨¦gar¨¦ C, Calvo E, Thimon V, Sullivan R.
Journal:Hum Reprod. 2013 Jun;28(6):1455-67.
Description:This study may provide new tools for predicting vasovasostomy success and openavenues for the identification of the molecular players involved in male infertility.