Entry Detail



General Information

Database ID:exR0724926
RNA Name:hsa-miR-516b-5p
RNA Type:miRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):53736860End Site(bp):53736881
External Links:hsa-miR-516b-5p



Disease Information

Disease Name:Vasectomy
Disease Category:Other Diseases
MeSH ID:D014659
Type:Analytical, Diagnostic and Therapeutic Techniques and Equipment Category/Surgical Procedures, Operative
Alias:Vasectomies//Vas Ligation//Ligation, Vas//Ligations, Vas//Vas Ligations//Vas Occlusion//Occlusion, Vas//Occlusions, Vas//Vas Occlusions//Vasectomy Seekers//Seeker, Vasectomy//Seekers, Vasectomy//Vasectomy Seeker//Vasectomy Seekers, Refused//Refused Vasectomy Seeker//Refused Vasectomy Seekers//Seeker, Refused Vasectomy//Seekers, Refused Vasectomy//Vasectomy Seeker, Refused//Intravasal Thread//Intravasal Threads//Thread, Intravasal//Threads, Intravasal//Vas Occlusion, Nonchemical//Nonchemical Vas Occlusion//Nonchemical Vas Occlusions//Occlusion, Nonchemical Vas//Occlusions, Nonchemical Vas//Vas Occlusions, Nonchemical



Expression Detail

GEO ID:GSE43676
Description:microRNA signature is altered in both human epididymis and seminal microvesicles following vasectomy.
Experimental Design:Vasectomy
Case Disease Type:Vasectomized
Case Disease SubType:NA
Case Sample:Vasectomized
Control Sample:Normal
Number of Case:1
Number of Control:1
Number of Samples:2





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
BCL2L11
chr2
111119378
111168445
+
CHKB-CPT1B
chr22
50568869
50582965
-
CPT1B
chr22
50568861
50578465
-
DNAJC9
chr10
73183362
73247255
-
FAM13B
chr5
137937960
138051961
-
FNBP4
chr11
47716494
47767443
-
FOSL2
chr2
28392448
28417317
+
FSD1
chr19
4304598
4323843
+
GOLGA1
chr9
124878275
124948492
-
HIF1AN
chr10
100529072
100559998
+
MAK16
chr8
33485182
33501262
+
NEMP1
chr12
57055643
57088063
-
NID1
chr1
235975830
236065109
-
PIGS
chr17
28553383
28571794
-
QSER1
chr11
32892820
32993316
+
RABGAP1
chr9
122940833
123104866
+
S100A16
chr1
153606886
153613145
-
SGPP1
chr14
63684216
63728065
-
STAT3
chr17
42313324
42388568
-
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000698
chr16
47531309
47549512
+
hsa_circ_0001727
chr7
99621041
99621930
+
hsa_circ_0001495
chr5
68470703
68471364
+
hsa_circ_0000825
chr18
8718421
8720494
+
hsa_circ_0001387
chr4
1902352
1936989
+
hsa_circ_0000038
chr1
28800065
28802803
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AC079781.5
chr7
97851688
97972985
-
AL157392.3
chr10
13631143
13668445
+
COL4A2-AS2
chr13
110456396
110463287
-
LINC00324
chr17
8220642
8224043
-
LINC01184
chr5
127939152
128083172
-
MIR194-2HG
chr11
64889560
64893449
-
NEAT1
chr11
65422774
65445540
+
PCBP1-AS1
chr2
69962263
70103220
-
TBC1D3P1-DHX40P1
chr17
59962363
60018975
-
TUG1
chr22
30969245
30979395
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:23539611
Title:microRNA signature is altered in both human epididymis and seminal microvesicles following vasectomy.
Author:Belleann¨¦e C, L¨¦gar¨¦ C, Calvo E, Thimon V, Sullivan R.
Journal:Hum Reprod. 2013 Jun;28(6):1455-67.
Description:This study may provide new tools for predicting vasovasostomy success and openavenues for the identification of the molecular players involved in male infertility.