Entry Detail



General Information

Database ID:exR0726030
RNA Name:hsa-miR-520b-3p
RNA Type:miRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):53701267End Site(bp):53701287
External Links:hsa-miR-520b-3p



Disease Information

Disease Name:Vasectomy
Disease Category:Other Diseases
MeSH ID:D014659
Type:Analytical, Diagnostic and Therapeutic Techniques and Equipment Category/Surgical Procedures, Operative
Alias:Vasectomies//Vas Ligation//Ligation, Vas//Ligations, Vas//Vas Ligations//Vas Occlusion//Occlusion, Vas//Occlusions, Vas//Vas Occlusions//Vasectomy Seekers//Seeker, Vasectomy//Seekers, Vasectomy//Vasectomy Seeker//Vasectomy Seekers, Refused//Refused Vasectomy Seeker//Refused Vasectomy Seekers//Seeker, Refused Vasectomy//Seekers, Refused Vasectomy//Vasectomy Seeker, Refused//Intravasal Thread//Intravasal Threads//Thread, Intravasal//Threads, Intravasal//Vas Occlusion, Nonchemical//Nonchemical Vas Occlusion//Nonchemical Vas Occlusions//Occlusion, Nonchemical Vas//Occlusions, Nonchemical Vas//Vas Occlusions, Nonchemical



Expression Detail

GEO ID:GSE43676
Description:microRNA signature is altered in both human epididymis and seminal microvesicles following vasectomy.
Experimental Design:Vasectomy
Case Disease Type:Vasectomized
Case Disease SubType:NA
Case Sample:Vasovasostomized
Control Sample:Normal
Number of Case:1
Number of Control:1
Number of Samples:2





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
TNS1
chr2
217799588
218033982
-
CLCN6
chr1
11806096
11848079
+
SIRPA
chr20
1894167
1940592
+
CELF2
chr10
10798397
11336675
+
MBP
chr18
76978827
77133683
-
PLAGL2
chr20
32192504
32207743
-
APP
chr21
25880550
26171128
-
KLHL28
chr14
44924319
45042322
-
SEC16A
chr9
136440096
136483759
-
CCDC93
chr2
117915478
118014133
-
MAGI3
chr1
113390515
113685923
+
PTP4A1
chr6
63521746
63583436
+
SYAP1
chrX
16719612
16765340
+
SEMA3C
chr7
80742538
80922359
-
ADAR
chr1
154582057
154628013
-
CUL1
chr7
148697914
148801110
+
CHD9
chr16
53055033
53329150
+
TRIB1
chr8
125430358
125438403
+
SLC16A14
chr2
230034982
230068993
-
IFNAR1
chr21
33324429
33359864
+
WDR82
chr3
52254434
52288020
-
RUNDC1
chr17
42980565
42993690
+
NPAS2
chr2
100820139
100996829
+
JPT1
chr17
75135248
75168281
-
LONP2
chr16
48244300
48363122
+
OCRL
chrX
129539849
129592561
+
ZFAND4
chr10
45615500
45672780
-
PHC3
chr3
170086732
170181749
-
ATXN1
chr6
16299112
16761491
-
FAM177A1
chr14
35044907
35113130
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL049840.4
chr14
103694516
103695050
-
ARHGAP27P1-BPTFP1-KPNA2P3
chr17
64749663
64781707
-
FGD5-AS1
chr3
14920347
14948424
-
MIR17HG
chr13
91347820
91354579
+
NEAT1
chr11
65422774
65445540
+
NORAD
chr20
36045618
36051018
-
SNHG16
chr17
76557764
76565348
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:23539611
Title:microRNA signature is altered in both human epididymis and seminal microvesicles following vasectomy.
Author:Belleann¨¦e C, L¨¦gar¨¦ C, Calvo E, Thimon V, Sullivan R.
Journal:Hum Reprod. 2013 Jun;28(6):1455-67.
Description:This study may provide new tools for predicting vasovasostomy success and openavenues for the identification of the molecular players involved in male infertility.