Entry Detail



General Information

Database ID:exR0726196
RNA Name:hsa-miR-642a-5p
RNA Type:miRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):45674943End Site(bp):45674964
External Links:hsa-miR-642a-5p



Disease Information

Disease Name:Vasectomy
Disease Category:Other Diseases
MeSH ID:D014659
Type:Analytical, Diagnostic and Therapeutic Techniques and Equipment Category/Surgical Procedures, Operative
Alias:Vasectomies//Vas Ligation//Ligation, Vas//Ligations, Vas//Vas Ligations//Vas Occlusion//Occlusion, Vas//Occlusions, Vas//Vas Occlusions//Vasectomy Seekers//Seeker, Vasectomy//Seekers, Vasectomy//Vasectomy Seeker//Vasectomy Seekers, Refused//Refused Vasectomy Seeker//Refused Vasectomy Seekers//Seeker, Refused Vasectomy//Seekers, Refused Vasectomy//Vasectomy Seeker, Refused//Intravasal Thread//Intravasal Threads//Thread, Intravasal//Threads, Intravasal//Vas Occlusion, Nonchemical//Nonchemical Vas Occlusion//Nonchemical Vas Occlusions//Occlusion, Nonchemical Vas//Occlusions, Nonchemical Vas//Vas Occlusions, Nonchemical



Expression Detail

GEO ID:GSE43676
Description:microRNA signature is altered in both human epididymis and seminal microvesicles following vasectomy.
Experimental Design:Vasectomy
Case Disease Type:Vasectomized
Case Disease SubType:NA
Case Sample:Vasovasostomized
Control Sample:Normal
Number of Case:1
Number of Control:1
Number of Samples:2





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AFF4
chr5
132875395
132963634
-
ARID3A
chr19
925781
975939
+
E2F3
chr6
20401879
20493714
+
GFOD1
chr6
13357830
13487662
-
HIF1AN
chr10
100529072
100559998
+
MAP3K12
chr12
53479669
53500063
-
MAPKAPK2
chr1
206684944
206734283
+
MDK
chr11
46380756
46383837
+
PPP6R1
chr19
55229779
55259017
-
SIK2
chr11
111602449
111730855
+
SLC7A2
chr8
17497088
17570573
+
SYVN1
chr11
65121780
65134533
-
TMED10
chr14
75131469
75176612
-
TMEM30B
chr14
61277370
61281761
-
UBR3
chr2
169827454
170084131
+
VAT1
chr17
43014607
43025123
-
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0001005
chr2
53921020
53978078
-
hsa_circ_0001146
chr20
34241449
34246936
-
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004832.5
chr22
30420512
30420912
+
AC007952.4
chr17
19112000
19112636
-
AC010327.5
chr19
55216660
55221616
+
AC016876.2
chr17
7581964
7584086
-
AL645465.1
chr1
244375100
244409592
-
MIR34AHG
chr1
9148011
9198906
-
MIR497HG
chr17
7015818
7019659
-
NEAT1
chr11
65422774
65445540
+
NORAD
chr20
36045618
36051018
-
ZFAS1
chr20
49278178
49299600
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:23539611
Title:microRNA signature is altered in both human epididymis and seminal microvesicles following vasectomy.
Author:Belleann¨¦e C, L¨¦gar¨¦ C, Calvo E, Thimon V, Sullivan R.
Journal:Hum Reprod. 2013 Jun;28(6):1455-67.
Description:This study may provide new tools for predicting vasovasostomy success and openavenues for the identification of the molecular players involved in male infertility.