Entry Detail


General Information

Database ID:exR0726305
RNA Name:AASDHPPT
RNA Type:mRNA
Chromosome:chr11
Starnd:+
Coordinate:
Start Site(bp):106075501End Site(bp):106098699
External Links:ENSG00000149313



Disease Information

Disease Name:Bladder Cancer
Disease Category:Cancers
MeSH ID:D001749
Type:Neoplasms/Urogenital Neoplasms
Alias:Urinary Bladder Neoplasms//Neoplasm, Urinary Bladder//Urinary Bladder Neoplasm//Neoplasms, Bladder//Bladder Neoplasms//Bladder Neoplasm//Neoplasm, Bladder//Bladder Tumors//Bladder Tumor//Tumor, Bladder//Tumors, Bladder//Urinary Bladder Cancer//Cancer, Urinary Bladder//Malignant Tumor of Urinary Bladder//Cancer of the Bladder//Bladder Cancer//Bladder Cancers//Cancer, Bladder//Cancer of Bladder



Expression Detail

GEO ID:GSE51843
Description:A Pilot Study on the Potential of RNA-Associated to Urinary Vesicles as a Suitable Non-Invasive Source for Diagnostic Purposes in Bladder Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Bladder Cancer
Case Disease SubType:NA
Case Sample:Bladder Cancer
Control Sample:Control
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
GTF2F2
chr13
45120510
45284893
+
CFL1
chr11
65823022
65862026
-
NUP93
chr16
56730118
56850286
+
HSD17B8
chr6
33204655
33206831
+
RPL3
chr22
39312882
39320389
-
RASSF3
chr12
64507001
64697564
+
TMBIM6
chr12
49707725
49764934
+
HNRNPL
chr19
38836388
38852347
-
CXXC4
chr4
104468308
104494901
-
PSME3
chr17
42824385
42843760
+
AHCY
chr20
34280268
34311802
-
ESRP1
chr8
94641074
94707466
+
AKAP10
chr17
19904302
19978343
-
PCLAF
chr15
64364304
64387687
-
COA3
chr17
42795147
42798704
-
MTA2
chr11
62593214
62601865
-
EIF4G2
chr11
10797050
10808940
-
WDR73
chr15
84639281
84654343
-
PUM2
chr2
20248691
20352234
-
GTPBP6
chrX
304529
318819
-
NAP1L4
chr11
2944431
2992377
-
MATR3
chr5
139273752
139331671
+
IRF7
chr11
612553
615983
-
SINHCAF
chr12
31280584
31327058
-
RAB8A
chr19
16111889
16134234
+
SPG21
chr15
64963022
64990310
-
PANK3
chr5
168548495
168579368
-
DIAPH1
chr5
141515016
141619055
-
RPS29
chr14
49570984
49599164
-
HMGA1
chr6
34236873
34246231
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC064807.1
chr8
51899268
51949874
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:24458310
Title:A Pilot Study on the Potential of RNA-Associated to Urinary Vesicles as a Suitable Non-Invasive Source for Diagnostic Purposes in Bladder Cancer.
Author:Perez A, Loizaga A, Arceo R, Lacasa I, Rabade A, Zorroza K,Mosen-Ansorena D, Gonzalez E, Aransay AM, Falcon-Perez JM, Unda-Urzaiz M, Royo F.
Journal:Cancers (Basel). 2014 Jan 22;6(1):179-92.
Description:LASS2 and GALNT1 were present in cancer patients, while ARHGEF39 and FOXO3 were found only in non-cancer urinary vesicles, which could be diagnostic markers for bladder cancer.