Entry Detail


General Information

Database ID:exR0726313
RNA Name:ABI1
RNA Type:mRNA
Chromosome:chr10
Starnd:-
Coordinate:
Start Site(bp):26746593End Site(bp):26861087
External Links:ENSG00000136754



Disease Information

Disease Name:Bladder Cancer
Disease Category:Cancers
MeSH ID:D001749
Type:Neoplasms/Urogenital Neoplasms
Alias:Urinary Bladder Neoplasms//Neoplasm, Urinary Bladder//Urinary Bladder Neoplasm//Neoplasms, Bladder//Bladder Neoplasms//Bladder Neoplasm//Neoplasm, Bladder//Bladder Tumors//Bladder Tumor//Tumor, Bladder//Tumors, Bladder//Urinary Bladder Cancer//Cancer, Urinary Bladder//Malignant Tumor of Urinary Bladder//Cancer of the Bladder//Bladder Cancer//Bladder Cancers//Cancer, Bladder//Cancer of Bladder



Expression Detail

GEO ID:GSE51843
Description:A Pilot Study on the Potential of RNA-Associated to Urinary Vesicles as a Suitable Non-Invasive Source for Diagnostic Purposes in Bladder Cancer
Experimental Design:Cancer vs Control
Case Disease Type:Bladder Cancer
Case Disease SubType:NA
Case Sample:Bladder Cancer
Control Sample:Control
Number of Case:5
Number of Control:6
Number of Samples:11





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
B2M
chr15
44711487
44718877
+
RPS27L
chr15
63125872
63158021
-
MTRNR2L1
chr17
22523111
22524663
+
PSMB1
chr6
170535120
170553307
-
COPG1
chr3
129249606
129277773
+
TTF1
chr9
132375548
132406851
-
TCEA1
chr8
53966552
54022456
-
AGK
chr7
141551278
141655244
+
WAC
chr10
28532493
28623112
+
ACLY
chr17
41866917
41930542
-
SUMO3
chr21
44805617
44818779
-
LARP1
chr5
154712843
154817605
+
IL10RB
chr21
33266367
33310187
+
RNF125
chr18
32018825
32073219
+
AFF1
chr4
86935002
87141054
+
PTMS
chr12
6765516
6770952
+
UBE3C
chr7
157138916
157269370
+
THOP1
chr19
2785503
2815807
+
SLC30A5
chr5
69093949
69131069
+
KIF23
chr15
69414246
69448427
+
PAN3
chr13
28138506
28295335
+
CCT4
chr2
61868085
61888671
-
BUB1
chr2
110637528
110678063
-
MTHFD2
chr2
74198610
74217565
+
ARID1A
chr1
26693236
26782104
+
TAF10
chr11
6606294
6612539
-
MYO19
chr17
36495633
36543435
-
SRRM2
chr16
2752626
2772538
+
SRPK1
chr6
35832966
35921342
-
RPLP1
chr15
69452814
69456205
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC091564.7
chr11
6610883
6616594
-
AL158066.1
chr13
52167709
52291557
-
AL355075.4
chr14
20343048
20343685
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:24458310
Title:A Pilot Study on the Potential of RNA-Associated to Urinary Vesicles as a Suitable Non-Invasive Source for Diagnostic Purposes in Bladder Cancer.
Author:Perez A, Loizaga A, Arceo R, Lacasa I, Rabade A, Zorroza K,Mosen-Ansorena D, Gonzalez E, Aransay AM, Falcon-Perez JM, Unda-Urzaiz M, Royo F.
Journal:Cancers (Basel). 2014 Jan 22;6(1):179-92.
Description:LASS2 and GALNT1 were present in cancer patients, while ARHGEF39 and FOXO3 were found only in non-cancer urinary vesicles, which could be diagnostic markers for bladder cancer.