Entry Detail


General Information

Database ID:exR0728463
RNA Name:hsa-miR-1197
RNA Type:miRNA
Chromosome:chr14
Starnd:+
Coordinate:
Start Site(bp):101025620End Site(bp):101025640
External Links:hsa-miR-1197



Disease Information

Disease Name:Prostate Cancer
Disease Category:Cancers
MeSH ID:D011471
Type:Neoplasms/Digestive System Neoplasms
Alias:Prostatic Neoplasms//Prostate Neoplasms//Neoplasms, Prostate//Neoplasm, Prostate//Prostate Neoplasm//Neoplasms, Prostatic//Neoplasm, Prostatic//Prostatic Neoplasm//Prostate Cancer//Cancer, Prostate//Cancers, Prostate//Prostate Cancers//Cancer of the Prostate//Prostatic Cancer//Cancer, Prostatic//Cancers, Prostatic//Prostatic Cancers//Cancer of Prostate



Expression Detail

GEO ID:GSE54010
Description:miRNA expression profiles in the 19 candidate urines (prostate cancer, CaP, patients and non-cancer subjects with benign prostatic hyperplasia, BPH)
Experimental Design:Cancer vs Control
Case Disease Type:Prostate Cancer
Case Disease SubType:Advanced Prostate Cancer
Case Sample:Advanced Prostate Cancer
Control Sample:Benign Prostatic Hyperplasia
Number of Case:7
Number of Control:5
Number of Samples:12





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AKAP1
chr17
57085092
57121346
+
ATP6V0D1
chr16
67438014
67481181
-
CBL
chr11
119206298
119313926
+
CDT1
chr16
88803789
88809258
+
NADK
chr1
1751232
1780457
-
ORAI1
chr12
121626550
121642677
+
REEP4
chr8
22138020
22141951
-
SCD
chr10
100347233
100364826
+
TIMM13
chr19
2425625
2427586
-
TIMP2
chr17
78852977
78925387
-
WDR33
chr2
127701027
127811187
-
ZBTB5
chr9
37438102
37465450
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AC020978.7
chr16
68224713
68227734
+
NEAT1
chr11
65422774
65445540
+
OIP5-AS1
chr15
41283990
41309737
+
SNHG5
chr6
85650491
85678932
-
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE54010
Sample Source:Urine
Source Fraction:Urine
Platform:GPL15159
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1183
Sample treatment protocol:NA
RNA Extract protocol:Total RNA was extracted using RecoverAllTM Total Nucleic Acid Isolation kit (Life Technologies, Carlsbad, CA).
RNA library preparation protocol:400 ng of total RNA was labeled with cyanine 3-pCp using the Agilent miRNA Complete Labeling kit and hybridized to the array according to the manufacturer's protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA