Entry Detail


General Information

Database ID:exR0728892
RNA Name:hsa-miR-3164
RNA Type:miRNA
Chromosome:chr11
Starnd:+
Coordinate:
Start Site(bp):69083185End Site(bp):69083206
External Links:hsa-miR-3164



Disease Information

Disease Name:Prostate Cancer
Disease Category:Cancers
MeSH ID:D011471
Type:Neoplasms/Digestive System Neoplasms
Alias:Prostatic Neoplasms//Prostate Neoplasms//Neoplasms, Prostate//Neoplasm, Prostate//Prostate Neoplasm//Neoplasms, Prostatic//Neoplasm, Prostatic//Prostatic Neoplasm//Prostate Cancer//Cancer, Prostate//Cancers, Prostate//Prostate Cancers//Cancer of the Prostate//Prostatic Cancer//Cancer, Prostatic//Cancers, Prostatic//Prostatic Cancers//Cancer of Prostate



Expression Detail

GEO ID:GSE54010
Description:miRNA expression profiles in the 19 candidate urines (prostate cancer, CaP, patients and non-cancer subjects with benign prostatic hyperplasia, BPH)
Experimental Design:Cancer vs Control
Case Disease Type:Prostate Cancer
Case Disease SubType:Advanced Prostate Cancer
Case Sample:Advanced Prostate Cancer
Control Sample:Benign Prostatic Hyperplasia
Number of Case:7
Number of Control:5
Number of Samples:12





Regulatory Relationship

mRNA targets:NA
miRNA targets:NA
circRNA targets:
circRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa_circ_0000921
chr19
30476129
30477324
+
hsa_circ_0001531
chr5
132426884
132428481
+
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC074117.1
chr2
27356246
27367622
+
ADAMTSL4-AS1
chr1
150560202
150574552
-
AL137129.1
chr14
61734138
61776260
+
LINC00324
chr17
8220642
8224043
-
NEAT1
chr11
65422774
65445540
+
NUTM2B-AS1
chr10
79661394
79826594
-
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE54010
Sample Source:Urine
Source Fraction:Urine
Platform:GPL15159
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:1183
Sample treatment protocol:NA
RNA Extract protocol:Total RNA was extracted using RecoverAllTM Total Nucleic Acid Isolation kit (Life Technologies, Carlsbad, CA).
RNA library preparation protocol:400 ng of total RNA was labeled with cyanine 3-pCp using the Agilent miRNA Complete Labeling kit and hybridized to the array according to the manufacturer's protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA