exRNAdisease

Entry Detail

General Information

Database ID:

exR0728948

RNA Name:

hsa-miR-326

RNA Type:

miRNA

Chromosome:

chr11

Starnd:

-

Coordinate:

Start Site(bp):

75335108

End Site(bp):

75335127

External Links:

Disease Information

Disease Name:	Prostate Cancer
Disease Category:	Cancers
MeSH ID:	D011471
Type:	Neoplasms/Digestive System Neoplasms
Alias:	Prostatic Neoplasms//Prostate Neoplasms//Neoplasms, Prostate//Neoplasm, Prostate//Prostate Neoplasm//Neoplasms, Prostatic//Neoplasm, Prostatic//Prostatic Neoplasm//Prostate Cancer//Cancer, Prostate//Cancers, Prostate//Prostate Cancers//Cancer of the Prostate//Prostatic Cancer//Cancer, Prostatic//Cancers, Prostatic//Prostatic Cancers//Cancer of Prostate

Expression Detail

GEO ID:	GSE54010
Description:	miRNA expression profiles in the 19 candidate urines (prostate cancer, CaP, patients and non-cancer subjects with benign prostatic hyperplasia, BPH)
Experimental Design:	Cancer vs Control
Case Disease Type:	Prostate Cancer
Case Disease SubType:	Advanced Prostate Cancer
Case Sample:	Advanced Prostate Cancer
Control Sample:	Benign Prostatic Hyperplasia
Number of Case:	7
Number of Control:	5
Number of Samples:	12

Regulatory Relationship

mRNA targets:

Gene Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
DOLPP1	chr9	129081111	129090438	+
GOSR2	chr17	46923075	46975524	+
ITGA5	chr12	54395261	54419266	-
MAP4	chr3	47850690	48089272	-
NME4	chr16	396725	410367	+
PAQR4	chr16	2969270	2973484	+
RC3H1	chr1	173931084	174022357	-
REXO1	chr19	1815248	1848483	-
RTL10	chr22	19846138	19854896	-
STX3	chr11	59713456	59805882	+
TSPAN14	chr10	80454166	80533124	+

miRNA targets:

NA

circRNA targets:

circRNA Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
hsa_circ_0000128	chr1	151139409	151139890	+
hsa_circ_0000384	chr12	27867712	27877119	+
hsa_circ_0001727	chr7	99621041	99621930	+
hsa_circ_0001865	chr9	86292641	86293514	-

lncRNA targets:

lncRNA Symbol	Chromosome	Start Site(bp)	End Site(bp)	Strand
AC016876.2	chr17	7581964	7584086	-
AC144548.1	chr12	110387463	110445548	-
AL355075.4	chr14	20343048	20343685	-
AL359924.1	chr1	237862175	237928321	+
AP000553.1	chr22	21652270	21670237	+
KCNQ1OT1	chr11	2608328	2699994	-
MIRLET7BHG	chr22	46053869	46113928	+
NEAT1	chr11	65422774	65445540	+
SNHG1	chr11	62851984	62855953	-
SNHG3	chr1	28505980	28510892	+
TUG1	chr22	30969245	30979395	+
XIST	chrX	73820649	73852723	-

Display:

Experiment Detail

GEO ID:	GSE54010
Sample Source:	Urine
Source Fraction:	Urine
Platform:	GPL15159
Method:	Microarray
Num of detected RNA Type:	1
Num of detected RNAs of this Type:	1183
Sample treatment protocol:	NA
RNA Extract protocol:	Total RNA was extracted using RecoverAllTM Total Nucleic Acid Isolation kit (Life Technologies, Carlsbad, CA).
RNA library preparation protocol:	400 ng of total RNA was labeled with cyanine 3-pCp using the Agilent miRNA Complete Labeling kit and hybridized to the array according to the manufacturer's protocol.

Reference

PMID:	NA
Title:	NA
Author:	NA
Journal:	NA
Description:	NA