exRNAdisease

Entry Detail

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General Information

Database ID: exR0749464 RNA Name: hsa-miR-107 RNA Type: miRNA Chromosome: chr10 Starnd: - Coordinate: Start Site(bp): 89592756 End Site(bp): 89592778 External Links: hsa-miR-107

Disease Information

Disease Name: Lactation Disease Category: Other Diseases MeSH ID: D007774 Type: Phenomena and Processes Category/Reproductive and Urinary Physiological Phenomena Alias: Milk Secretion//Milk Secretions//Lactation, Prolonged//Lactations, Prolonged//Prolonged Lactation//Prolonged Lactations

Expression Detail

GEO ID: GSE75726 Description: Human milk cells and lipids conserve numerous known and novel miRNAs, some of which are differentially expressed during lactation Experimental Design: Time Series Case Disease Type: Lactation Case Disease SubType: NA Case Sample: Post-feeding, month 4 of lactation Control Sample: Post-feeding, month 2 of lactation Number of Case: 5 Number of Control: 5 Number of Samples: 10

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand STEAP3 chr2 119223831 119265652 + UBE2J1 chr6 89326625 89352722 - SIK2 chr11 111602449 111730855 + ATXN7L3 chr17 44191805 44200113 - FOSL2 chr2 28392448 28417317 + KLC1 chr14 103561896 103714249 + NCAPD2 chr12 6493356 6531955 + RDH11 chr14 67676800 67695793 - RNF157 chr17 76142465 76240493 - SEC61A1 chr3 128051641 128071683 + RRP1B chr21 43659560 43696079 + RTL8B chrX 135020513 135022542 - MRPS2 chr9 135499984 135504673 + SCAMP4 chr19 1905372 1926013 + AP3M1 chr10 74120255 74151063 - AC011455.2 chr19 38915404 38949855 - ZNF697 chr1 119619377 119648266 - STK40 chr1 36339624 36385896 - ABHD2 chr15 89087459 89202355 + SPRYD3 chr12 53064316 53079404 - BTBD1 chr15 83016423 83067252 - PLPP6 chr9 4662294 4665258 + ERG28 chr14 75649791 75660876 - SRPK1 chr6 35832966 35921342 - BIRC5 chr17 78214186 78225636 + RCCD1 chr15 90954870 90963125 + SFN chr1 26863149 26864456 + NAA60 chr16 3443649 3486953 + ABCF2 chr7 151207837 151227166 - JPT2 chr16 1678256 1702280 + miRNA targets: NA circRNA targets: circRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa_circ_0000712 chr16 68208276 68225678 + hsa_circ_0001723 chr7 91924202 91948826 + hsa_circ_0001495 chr5 68470703 68471364 + hsa_circ_0001168 chr20 47691321 47707559 + hsa_circ_0000652 chr15 90984737 90986710 + hsa_circ_0001472 chr5 36953719 36976504 + hsa_circ_0001164 chr20 45891031 45923523 - lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC003092.1 chr7 94022833 94066661 + AC018521.1 chr17 47945424 47981736 + AC021078.1 chr5 149494314 149504670 - AC021092.1 chr19 44103007 44113183 - AC093297.2 chr5 44826076 44828592 + AL137127.1 chr1 19072110 19075511 - FGD5-AS1 chr3 14920347 14948424 - H19 chr11 1995176 2001470 - LINC00294 chr11 33076149 33079454 + LINC00662 chr19 27681072 27794005 - LINC02035 chr3 122886941 122892416 + MIR503HG chrX 134543119 134546642 - NEAT1 chr11 65422774 65445540 + NUTM2A-AS1 chr10 87201647 87342612 - NUTM2B-AS1 chr10 79661394 79826594 - STAG3L5P-PVRIG2P-PILRB chr7 100336104 100367831 + TMEM147-AS1 chr19 35540738 35546029 - TTC28-AS1 chr22 27919376 28008581 + TTN-AS1 chr2 178521183 178779963 + XIST chrX 73820649 73852723 - Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27074017 Title: Human Milk Cells and Lipids Conserve Numerous Known and Novel miRNAs, Some of Which Are Differentially Expressed during Lactation Author: Alsaweed M, Lai CT, Hartmann PE, Geddes DT, Kakulas F Journal: PLoS One. 2016 Apr 13;11(4):e0152610. Description: We used deep sequencing to profile miRNAs in the cell and lipid fractions of HM obtained post-feeding from 10 lactating women in months 2, 4, and 6 postpartum.