exRNAdisease

Entry Detail

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General Information

Database ID: exR0755310 RNA Name: ABHD17A RNA Type: mRNA Chromosome: chr19 Starnd: - Coordinate: Start Site(bp): 1876810 End Site(bp): 1885547 External Links: ENSG00000129968

Disease Information

Disease Name: Glioblastoma Multiforme Disease Category: Cancers MeSH ID: D005909 Type: Neoplasms/Neoplasms, Glandular and Epithelial Alias: Glioblastoma//Glioblastomas//Astrocytoma, Grade IV//Astrocytomas, Grade IV//Grade IV Astrocytoma//Grade IV Astrocytomas//Glioblastoma Multiforme//Giant Cell Glioblastoma//Giant Cell Glioblastomas//Glioblastoma, Giant Cell//Glioblastomas, Giant Cell

Expression Detail

GEO ID: GSE106804 Description: Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles Experimental Design: Cancer vs Control Case Disease Type: Glioblastoma Multiforme Case Disease SubType: NA Case Sample: Glioblastoma Multiforme Control Sample: Healthy Number of Case: 13 Number of Control: 6 Number of Samples: 19

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand SLC20A2 chr8 42416475 42541926 - PPP4R3A chr14 91457611 91510554 - AP001931.1 chr11 57741779 57804771 + EFNB2 chr13 106489745 106535662 - DNAJB1 chr19 14514769 14529770 - RPS15 chr19 1438358 1440494 + MSH5-SAPCD1 chr6 31740020 31764851 + TUBB2A chr6 3153666 3157544 - NBEAL2 chr3 46979666 47009704 + PRPF6 chr20 63981132 64033100 + PIP5K1C chr19 3630183 3700479 - CEBPG chr19 33373685 33382686 + NAA16 chr13 41311267 41377030 + SUPT5H chr19 39436156 39476670 + MT-CO2 chrMT 7586 8269 + LUC7L2 chr7 139340359 139423457 + AC091167.2 chr15 90249556 90272208 + ELMO2 chr20 46366050 46432985 - HNRNPH1 chr5 179614178 179634784 - ACOT7 chr1 6264269 6394391 - SETD5 chr3 9397615 9479240 + ABHD17C chr15 80679684 80755621 + GPX4 chr19 1103926 1106791 + EIF5 chr14 103333544 103345025 + NUB1 chr7 151341699 151378449 + FGFR1 chr8 38400215 38468834 - NF2 chr22 29603556 29698598 + RBCK1 chr20 407498 430966 + UPF1 chr19 18831938 18868236 + SLC25A3 chr12 98593591 98606379 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 29330365 Title: Engineered nanointerfaces for microfluidic isolation and molecular profiling of tumor-specific extracellular vesicles. Author: Re¨¢tegui E, van der Vos KE, Lai CP, Zeinali M, Atai NA, Aldikacti B, Floyd FP Jr, H Khankhel A, Thapar V, Hochberg FH, Sequist LV, Nahed BV, S Carter B, Toner M, Balaj L, T Ting D, Breakefield XO, Stott SL. Journal: Nat Commun. 2018 Jan 12;9(1):175. Description: Tumor-derived EVs have the potential to be utilized as disease-specific biomarkers, and genes specific to GBM as well as transcripts that are hallmarks for the four genetic subtypes of the disease.