exRNAdisease

Entry Detail

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General Information

Database ID: exR0755311 RNA Name: ABHD17B RNA Type: mRNA Chromosome: chr9 Starnd: - Coordinate: Start Site(bp): 71862452 End Site(bp): 71910931 External Links: ENSG00000107362

Disease Information

Disease Name: Glioblastoma Multiforme Disease Category: Cancers MeSH ID: D005909 Type: Neoplasms/Neoplasms, Glandular and Epithelial Alias: Glioblastoma//Glioblastomas//Astrocytoma, Grade IV//Astrocytomas, Grade IV//Grade IV Astrocytoma//Grade IV Astrocytomas//Glioblastoma Multiforme//Giant Cell Glioblastoma//Giant Cell Glioblastomas//Glioblastoma, Giant Cell//Glioblastomas, Giant Cell

Expression Detail

GEO ID: GSE106804 Description: Engineered Nanointerfaces for Microfluidic Isolation and Molecular Profiling of Tumor-specific Extracellular Vesicles Experimental Design: Cancer vs Control Case Disease Type: Glioblastoma Multiforme Case Disease SubType: NA Case Sample: Glioblastoma Multiforme Control Sample: Healthy Number of Case: 13 Number of Control: 6 Number of Samples: 19

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand FBN2 chr5 128257909 128659185 - EIF4G2 chr11 10797050 10808940 - TXNDC12 chr1 52020131 52055191 - CSTF3 chr11 33077188 33162371 - GDI2 chr10 5765223 5842132 - VAT1 chr17 43014607 43025123 - PNRC2 chr1 23956839 23963462 + MDK chr11 46380756 46383837 + IBTK chr6 82169986 82247754 - TMPO chr12 98515512 98550379 + SRP9 chr1 225777813 225790468 + FBXL20 chr17 39252663 39402523 - TPX2 chr20 31739271 31801805 + SLC2A3 chr12 7919230 7936187 - DDX42 chr17 63773603 63819317 + SKA3 chr13 21153595 21176552 - PA2G4 chr12 56104537 56113910 + GOT2 chr16 58707131 58734342 - CENPV chr17 16342534 16353656 - TOMM7 chr7 22812628 22822852 - WBP4 chr13 41061509 41084006 + RPS9 chr19 54200809 54249003 + RPL37A chr2 216498825 216579180 + MT-CO2 chrMT 7586 8269 + MRPL43 chr10 100969458 100987515 - LAMA5 chr20 62307955 62367312 - VPS51 chr11 65089324 65111862 + GNAL chr18 11689264 11885685 + EEF1G chr11 62559596 62574086 - KLHDC2 chr14 49768130 49786385 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 29330365 Title: Engineered nanointerfaces for microfluidic isolation and molecular profiling of tumor-specific extracellular vesicles. Author: Re¨¢tegui E, van der Vos KE, Lai CP, Zeinali M, Atai NA, Aldikacti B, Floyd FP Jr, H Khankhel A, Thapar V, Hochberg FH, Sequist LV, Nahed BV, S Carter B, Toner M, Balaj L, T Ting D, Breakefield XO, Stott SL. Journal: Nat Commun. 2018 Jan 12;9(1):175. Description: Tumor-derived EVs have the potential to be utilized as disease-specific biomarkers, and genes specific to GBM as well as transcripts that are hallmarks for the four genetic subtypes of the disease.